| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is smg
Identifier: 124265473
GI number: 124265473
Start: 305819
End: 306271
Strand: Reverse
Name: smg
Synonym: Mpe_A0280
Alternate gene names: 124265473
Gene position: 306271-305819 (Counterclockwise)
Preceding gene: 124265474
Following gene: 124265460
Centisome position: 7.57
GC content: 61.81
Gene sequence:
>453_bases ATGTTCGACGTGCTCGTGTATCTCTACGAAAACTACTGGCAGCCCGACGCGTGCCCCGATCACCGGCAGCTGTCTCGCAA GCTCTCTGCGGTGGGCTTCGAGAACGAGGAGATCGAGGACGCGCTGAGCTGGCTGGACGGTTTGGCGACGGCCGCCGAGT CACACAGCGGCGAGCAGAGTGCGCATGCGCTGCGCGTTTATTCGCCGATGGAGCAGGAACACCTGGGCGAGGCCTCGATC GGCTTCGTCAGCTTTCTCGAATCGGCCGGTGTGTTGCGCGCACCGATGCGCGAGATGGTGATCGATCGCGCGATGGCGAT TCCCGCTGGTCCGCTGGCCGTCGAAGACCTGAAGATCATCGTTCTGATGGTGTTCTGGAGCCTGGGTGAAGAGCCCGACG CACTGATCCTCGACGAGTTGTTCGTCGATGACGAGGATCGTCTGATCCACTGA
Upstream 100 bases:
>100_bases CTCGTACAGGCCTGAGACCCTGCACGCTGAACGCCCCGCATCCGTGCCGGCGAATGCCGGCGGCGCCCTTCGCCTGACAC CCCCTGTGGTATCTTGTCGC
Downstream 100 bases:
>100_bases CGAACCGGCGCGGTTGCCGCGCCCCTCGTCCATTCAGTTCAGCAAGCGCTGCGGGTCAGCGTCTAGCTTGGCCAGCGCGC TGCGGGTCGCGCGCACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGEQSAHALRVYSPMEQEHLGEASI GFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVEDLKIIVLMVFWSLGEEPDALILDELFVDDEDRLIH
Sequences:
>Translated_150_residues MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGEQSAHALRVYSPMEQEHLGEASI GFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVEDLKIIVLMVFWSLGEEPDALILDELFVDDEDRLIH >Mature_150_residues MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGEQSAHALRVYSPMEQEHLGEASI GFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVEDLKIIVLMVFWSLGEEPDALILDELFVDDEDRLIH
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family
Homologues:
Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=36.3057324840764, Blast_Score=89, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SMG_METPP (A2SCF3)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019477.1 - STRING: A2SCF3 - GeneID: 4786889 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0280 - NMPDR: fig|279263.3.peg.174 - eggNOG: COG2922 - HOGENOM: HBG518884 - OMA: EMRVDQD - PhylomeDB: A2SCF3 - ProtClustDB: CLSK2321756 - BioCyc: MPET420662:MPE_A0280-MONOMER - HAMAP: MF_00598 - InterPro: IPR007456
Pfam domain/function: PF04361 DUF494
EC number: NA
Molecular weight: Translated: 16833; Mature: 16833
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGEQS CHHHHEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH AHALRVYSPMEQEHLGEASIGFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVEDLKII HHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLMVFWSLGEEPDALILDELFVDDEDRLIH HHHHHHHCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGEQS CHHHHEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH AHALRVYSPMEQEHLGEASIGFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVEDLKII HHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLMVFWSLGEEPDALILDELFVDDEDRLIH HHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA