Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265429

Identifier: 124265429

GI number: 124265429

Start: 251744

End: 253069

Strand: Reverse

Name: 124265429

Synonym: Mpe_A0236

Alternate gene names: NA

Gene position: 253069-251744 (Counterclockwise)

Preceding gene: 124265430

Following gene: 124265428

Centisome position: 6.26

GC content: 71.72

Gene sequence:

>1326_bases
ATGCGCCGCGTCGCCGTCATCGGGTCAGGGATTGCCGGTCTGGCTGCGGCCCACGCCCTGACCACGGAGCCCTCGCCGGC
GCCGCTCGCGGTGACGCTGTTCGAAGCGGGCGACTATCTCGGCGGGCACACCCACACGGTCGACATCACGCTCCCGGGCA
CGAACGGTCCGGTCTCTCACGGCGTGGACACCGGCTTCCTGGTGTTCAACCACCGCACCTATCCCAAGCTGGTGGGCCTG
TTCGAGGCCCTCGGCGTGGCGACCGCGCCGTCGGACATGTCGTTCTCGGTGCAGGCGCCCGACGCCGGGGCCGCGGGGCT
CGAGTGGAGCGGCTGCAATCTGGACACGGTGTTCGCGCAGCGCCGAAACGTCGCGCGCCCGCGGTTCTGGCGGATGCTGA
GGGACATCCTGCGTTTCAACCGTCTCGCGACCGCGATCGCGGAGCGCAACGAGGATGCGCAGCTCACGCAGCCGATCGGC
GATTTCCTGGCCGAGCACGCCTTCAGCCCCGAGTTCCGCGACTGGTACTTCCTGCCGATGATCGGCTGCATCTGGTCCTG
TCCGACCGATCAGATGCTGCGTTTTCCGGTCGCGACGATGATCCGCTTCTGCCACAACCACGGCCTGATCCAGGTGACCG
ACCGGCCGCAGTGGCACACGGTGCGCGGCGGCGCGCGGCACTACGTCCGGAAGATCGCCGAGCGACTGGCCGACGTGCGC
CTGTCCACGCCGGTGCGTCGGGTGATGCACGTGCCCGGCGGCGTGCGGGTCGCCACCGACGCCGGCAGCCTGCCGTTCGA
CGCGGTCGTGCTGGCCTGCCACAGCGACCAGGCGCTGGCGCTGCTGGCCGATCCGACCCCGCAAGAACGCGCCGTGCTCG
GCGCGATCCGCTACCAGCCGAATCGCGCGGTGCTGCACACCGACAGCTCGGTGCTGCCGAAGCGCCGCCGGGCCTGGGCC
GCCTGGAACTACGAGCGCGCCACGACCGGCTCGCGCGAGCAGGCTGCGGTCTGCCTGCACTACCTGATGAACCGGCTGCA
GCCGTTGCCGTTCCAGCAGCCTGTCGTCGTGTCGCTGAACCCGACCCGCGAACCGGCGCGCGGCAGCGTGCTCGGCGATT
ACGACTACGCCCACCCGGTGTTCGACCTCGCGGCCATTGAAGCGCAGCGGCGCCTGCCGGACATCCAGGGCGGCAGCGCG
CAGCGCTGGTACTGCGGCGCCTGGACCGGCTACGGCTTCCACGAGGACGGGCTGGCGTCCGGCCTGGCCGCGGCGCGGGC
CGTGCGCGGGTGGCTGGCCGCTGCGGCCGCGCCGCGTGCCGCATGA

Upstream 100 bases:

>100_bases
TCGCAGCATTTGTTCTTCCGATCGAGTCCCTCGCCGACCCGATCCTGACCCGCGACGCCGGTGTCCGCACCGGCGTCGCG
CCGTCTGCGCGGTGATGCCG

Downstream 100 bases:

>100_bases
GCGGCCCGCTGGCCATGGGCATCGCCGCACGACCGCTGATCGCCTTCGGCAGCGTGCGCCACACGCGGCTGCGCCCGACG
CGACACGCGTTCGCCTACCC

Product: putative dehydrogenase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL
FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG
DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR
LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA
AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA
QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA

Sequences:

>Translated_441_residues
MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL
FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG
DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR
LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA
AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA
QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA
>Mature_441_residues
MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL
FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG
DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR
LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA
AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA
QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA

Specific function: Unknown

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48261; Mature: 48261

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSH
CCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC
GVDTGFLVFNHRTYPKLVGLFEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQ
CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH
RRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIGDFLAEHAFSPEFRDWYFLPM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHH
IGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR
HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHCH
LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQP
HHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHEEECC
NRAVLHTDSSVLPKRRRAWAAWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLN
CCEEEECCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSAQRWYCGAWTGYGFHEDGLAS
CCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
GLAAARAVRGWLAAAAAPRAA
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSH
CCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC
GVDTGFLVFNHRTYPKLVGLFEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQ
CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH
RRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIGDFLAEHAFSPEFRDWYFLPM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHH
IGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR
HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHCH
LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQP
HHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHEEECC
NRAVLHTDSSVLPKRRRAWAAWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLN
CCEEEECCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSAQRWYCGAWTGYGFHEDGLAS
CCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
GLAAARAVRGWLAAAAAPRAA
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA