| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265429
Identifier: 124265429
GI number: 124265429
Start: 251744
End: 253069
Strand: Reverse
Name: 124265429
Synonym: Mpe_A0236
Alternate gene names: NA
Gene position: 253069-251744 (Counterclockwise)
Preceding gene: 124265430
Following gene: 124265428
Centisome position: 6.26
GC content: 71.72
Gene sequence:
>1326_bases ATGCGCCGCGTCGCCGTCATCGGGTCAGGGATTGCCGGTCTGGCTGCGGCCCACGCCCTGACCACGGAGCCCTCGCCGGC GCCGCTCGCGGTGACGCTGTTCGAAGCGGGCGACTATCTCGGCGGGCACACCCACACGGTCGACATCACGCTCCCGGGCA CGAACGGTCCGGTCTCTCACGGCGTGGACACCGGCTTCCTGGTGTTCAACCACCGCACCTATCCCAAGCTGGTGGGCCTG TTCGAGGCCCTCGGCGTGGCGACCGCGCCGTCGGACATGTCGTTCTCGGTGCAGGCGCCCGACGCCGGGGCCGCGGGGCT CGAGTGGAGCGGCTGCAATCTGGACACGGTGTTCGCGCAGCGCCGAAACGTCGCGCGCCCGCGGTTCTGGCGGATGCTGA GGGACATCCTGCGTTTCAACCGTCTCGCGACCGCGATCGCGGAGCGCAACGAGGATGCGCAGCTCACGCAGCCGATCGGC GATTTCCTGGCCGAGCACGCCTTCAGCCCCGAGTTCCGCGACTGGTACTTCCTGCCGATGATCGGCTGCATCTGGTCCTG TCCGACCGATCAGATGCTGCGTTTTCCGGTCGCGACGATGATCCGCTTCTGCCACAACCACGGCCTGATCCAGGTGACCG ACCGGCCGCAGTGGCACACGGTGCGCGGCGGCGCGCGGCACTACGTCCGGAAGATCGCCGAGCGACTGGCCGACGTGCGC CTGTCCACGCCGGTGCGTCGGGTGATGCACGTGCCCGGCGGCGTGCGGGTCGCCACCGACGCCGGCAGCCTGCCGTTCGA CGCGGTCGTGCTGGCCTGCCACAGCGACCAGGCGCTGGCGCTGCTGGCCGATCCGACCCCGCAAGAACGCGCCGTGCTCG GCGCGATCCGCTACCAGCCGAATCGCGCGGTGCTGCACACCGACAGCTCGGTGCTGCCGAAGCGCCGCCGGGCCTGGGCC GCCTGGAACTACGAGCGCGCCACGACCGGCTCGCGCGAGCAGGCTGCGGTCTGCCTGCACTACCTGATGAACCGGCTGCA GCCGTTGCCGTTCCAGCAGCCTGTCGTCGTGTCGCTGAACCCGACCCGCGAACCGGCGCGCGGCAGCGTGCTCGGCGATT ACGACTACGCCCACCCGGTGTTCGACCTCGCGGCCATTGAAGCGCAGCGGCGCCTGCCGGACATCCAGGGCGGCAGCGCG CAGCGCTGGTACTGCGGCGCCTGGACCGGCTACGGCTTCCACGAGGACGGGCTGGCGTCCGGCCTGGCCGCGGCGCGGGC CGTGCGCGGGTGGCTGGCCGCTGCGGCCGCGCCGCGTGCCGCATGA
Upstream 100 bases:
>100_bases TCGCAGCATTTGTTCTTCCGATCGAGTCCCTCGCCGACCCGATCCTGACCCGCGACGCCGGTGTCCGCACCGGCGTCGCG CCGTCTGCGCGGTGATGCCG
Downstream 100 bases:
>100_bases GCGGCCCGCTGGCCATGGGCATCGCCGCACGACCGCTGATCGCCTTCGGCAGCGTGCGCCACACGCGGCTGCGCCCGACG CGACACGCGTTCGCCTACCC
Product: putative dehydrogenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA
Sequences:
>Translated_441_residues MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA >Mature_441_residues MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSHGVDTGFLVFNHRTYPKLVGL FEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQRRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIG DFLAEHAFSPEFRDWYFLPMIGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQPNRAVLHTDSSVLPKRRRAWA AWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLNPTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSA QRWYCGAWTGYGFHEDGLASGLAAARAVRGWLAAAAAPRAA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48261; Mature: 48261
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSH CCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC GVDTGFLVFNHRTYPKLVGLFEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQ CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH RRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIGDFLAEHAFSPEFRDWYFLPM HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHH IGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHCH LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQP HHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHEEECC NRAVLHTDSSVLPKRRRAWAAWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLN CCEEEECCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC PTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSAQRWYCGAWTGYGFHEDGLAS CCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH GLAAARAVRGWLAAAAAPRAA HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRVAVIGSGIAGLAAAHALTTEPSPAPLAVTLFEAGDYLGGHTHTVDITLPGTNGPVSH CCEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC GVDTGFLVFNHRTYPKLVGLFEALGVATAPSDMSFSVQAPDAGAAGLEWSGCNLDTVFAQ CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH RRNVARPRFWRMLRDILRFNRLATAIAERNEDAQLTQPIGDFLAEHAFSPEFRDWYFLPM HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHH IGCIWSCPTDQMLRFPVATMIRFCHNHGLIQVTDRPQWHTVRGGARHYVRKIAERLADVR HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHCH LSTPVRRVMHVPGGVRVATDAGSLPFDAVVLACHSDQALALLADPTPQERAVLGAIRYQP HHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHEEECC NRAVLHTDSSVLPKRRRAWAAWNYERATTGSREQAAVCLHYLMNRLQPLPFQQPVVVSLN CCEEEECCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC PTREPARGSVLGDYDYAHPVFDLAAIEAQRRLPDIQGGSAQRWYCGAWTGYGFHEDGLAS CCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH GLAAARAVRGWLAAAAAPRAA HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA