| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265408
Identifier: 124265408
GI number: 124265408
Start: 233019
End: 233681
Strand: Reverse
Name: 124265408
Synonym: Mpe_A0215
Alternate gene names: NA
Gene position: 233681-233019 (Counterclockwise)
Preceding gene: 124265409
Following gene: 124265407
Centisome position: 5.78
GC content: 71.34
Gene sequence:
>663_bases ATGCGCGCCGGCCGGCCCGGATCGGCCGCCATCGCCTCCTGCCCGTCCATGAAGCCTCTGCACCGCCGTTTGTCCGGATT GCCCACCCTGCTCCTGCTGCTGGCCGGCCTGCCGGCTCATGCCGTGCCGCTGGTGATCACGGTGACCGACGAAGAGGGCA CGCCACTGGCCGACGCCGTGGTGGCGGTGCAGGTCAAGGGCACCCCGCCCACCGCACCCCCCGGGGTCAGCGCCGAGCTG GGCCAGAAGAACAAGCGCTTCACGCCTGCGGTGCTGGCGGTGCAGACAGGCACCGCCGTCAGCTTCCCGAACTTCGACAC TGTGCGCCACCACGTCTATTCGTTCTCGCCGACCAAGACCTTCGAGCTCAAGCTCTACGCCGGCACGCCGGCCGCACCGG TGGTGTTCGACAAGCCCGGCACCGCGGTGCTCGGCTGCAACATCCATGACGCGATGACCGCCTACGTCCGGGTGGTCGAC ACGCCCTACTTCGCCCGCACCGACAGCGCCGGGCGCGCCCAGCTCGAGCTGCCCGCGGGCGACCACCAGCTGCAGACCTG GCACGCGCTGCTGGGTGTGGACGGGCCGGCACCGGTCCAGCCACTGAAGCTCGGCAGCACCCCCGCCACCGCCGCGGTGA AGCTGGACGCGAAGGCCCCCTGA
Upstream 100 bases:
>100_bases CTCGTGCTGCAGGCCTGAGGCGTCGGGTCGCCGCGCCTTCAGGACGTCCGCGCGCGGCCGATATCCCTGGCTGACACCCC ATTGCTCGCGCTCGCGCATC
Downstream 100 bases:
>100_bases GATGCCACTGCCGGCCTTCATGACGCCCAAGCGCCTGCAGTTCCGCATCGTCGCGCTGTTCCTGGGCCTGCTGCTGGTGG TGCAGCTGGCCAGCCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP
Sequences:
>Translated_220_residues MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP >Mature_220_residues MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22875; Mature: 22875
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAV CCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEE VAVQVKGTPPTAPPGVSAELGQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKT EEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHEEEECCCCCE FELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVDTPYFARTDSAGRAQLELPAG EEEEEEECCCCCCEEECCCCCEEEECCHHHHHEEEEEEECCCCEEECCCCCCEEEECCCC DHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP CCHHHHEEHEEECCCCCCCCEEEECCCCCEEEEEEECCCC >Mature Secondary Structure MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAV CCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEE VAVQVKGTPPTAPPGVSAELGQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKT EEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHEEEECCCCCE FELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVDTPYFARTDSAGRAQLELPAG EEEEEEECCCCCCEEECCCCCEEEECCHHHHHEEEEEEECCCCEEECCCCCCEEEECCCC DHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP CCHHHHEEHEEECCCCCCCCEEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA