Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265408

Identifier: 124265408

GI number: 124265408

Start: 233019

End: 233681

Strand: Reverse

Name: 124265408

Synonym: Mpe_A0215

Alternate gene names: NA

Gene position: 233681-233019 (Counterclockwise)

Preceding gene: 124265409

Following gene: 124265407

Centisome position: 5.78

GC content: 71.34

Gene sequence:

>663_bases
ATGCGCGCCGGCCGGCCCGGATCGGCCGCCATCGCCTCCTGCCCGTCCATGAAGCCTCTGCACCGCCGTTTGTCCGGATT
GCCCACCCTGCTCCTGCTGCTGGCCGGCCTGCCGGCTCATGCCGTGCCGCTGGTGATCACGGTGACCGACGAAGAGGGCA
CGCCACTGGCCGACGCCGTGGTGGCGGTGCAGGTCAAGGGCACCCCGCCCACCGCACCCCCCGGGGTCAGCGCCGAGCTG
GGCCAGAAGAACAAGCGCTTCACGCCTGCGGTGCTGGCGGTGCAGACAGGCACCGCCGTCAGCTTCCCGAACTTCGACAC
TGTGCGCCACCACGTCTATTCGTTCTCGCCGACCAAGACCTTCGAGCTCAAGCTCTACGCCGGCACGCCGGCCGCACCGG
TGGTGTTCGACAAGCCCGGCACCGCGGTGCTCGGCTGCAACATCCATGACGCGATGACCGCCTACGTCCGGGTGGTCGAC
ACGCCCTACTTCGCCCGCACCGACAGCGCCGGGCGCGCCCAGCTCGAGCTGCCCGCGGGCGACCACCAGCTGCAGACCTG
GCACGCGCTGCTGGGTGTGGACGGGCCGGCACCGGTCCAGCCACTGAAGCTCGGCAGCACCCCCGCCACCGCCGCGGTGA
AGCTGGACGCGAAGGCCCCCTGA

Upstream 100 bases:

>100_bases
CTCGTGCTGCAGGCCTGAGGCGTCGGGTCGCCGCGCCTTCAGGACGTCCGCGCGCGGCCGATATCCCTGGCTGACACCCC
ATTGCTCGCGCTCGCGCATC

Downstream 100 bases:

>100_bases
GATGCCACTGCCGGCCTTCATGACGCCCAAGCGCCTGCAGTTCCGCATCGTCGCGCTGTTCCTGGGCCTGCTGCTGGTGG
TGCAGCTGGCCAGCCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL
GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD
TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP

Sequences:

>Translated_220_residues
MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL
GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD
TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP
>Mature_220_residues
MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAVVAVQVKGTPPTAPPGVSAEL
GQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKTFELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVD
TPYFARTDSAGRAQLELPAGDHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22875; Mature: 22875

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAV
CCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEE
VAVQVKGTPPTAPPGVSAELGQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKT
EEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHEEEECCCCCE
FELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVDTPYFARTDSAGRAQLELPAG
EEEEEEECCCCCCEEECCCCCEEEECCHHHHHEEEEEEECCCCEEECCCCCCEEEECCCC
DHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP
CCHHHHEEHEEECCCCCCCCEEEECCCCCEEEEEEECCCC
>Mature Secondary Structure
MRAGRPGSAAIASCPSMKPLHRRLSGLPTLLLLLAGLPAHAVPLVITVTDEEGTPLADAV
CCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEE
VAVQVKGTPPTAPPGVSAELGQKNKRFTPAVLAVQTGTAVSFPNFDTVRHHVYSFSPTKT
EEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHEEEECCCCCE
FELKLYAGTPAAPVVFDKPGTAVLGCNIHDAMTAYVRVVDTPYFARTDSAGRAQLELPAG
EEEEEEECCCCCCEEECCCCCEEEECCHHHHHEEEEEEECCCCEEECCCCCCEEEECCCC
DHQLQTWHALLGVDGPAPVQPLKLGSTPATAAVKLDAKAP
CCHHHHEEHEEECCCCCCCCEEEECCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA