| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yhbN [C]
Identifier: 124265343
GI number: 124265343
Start: 158046
End: 158675
Strand: Reverse
Name: yhbN [C]
Synonym: Mpe_A0150
Alternate gene names: 124265343
Gene position: 158675-158046 (Counterclockwise)
Preceding gene: 124265344
Following gene: 124265342
Centisome position: 3.92
GC content: 70.79
Gene sequence:
>630_bases ATGCCGATTCCCTCCATGTCCGCTCCGACCCCCTATCCTGCATCGCGGTGCACCTTGCTGGCGCAGCCTGTTTGCCGGGC CGTCCTGGCGGTGCTGGGGCTGGCCCTGCTGCCGGCCTTCGCCGCCGAAAAGGCTGACCGCACCCAGCCGCTGGCCTTCA CTGCCGACTCGGCCCGGGTCGACGAGGTCAAGCAATTGAACATCCTGTCGGGCAACGTCGAGATCACCAAGGGCAGCATC GTCATCCGCGCCGACCGCGTGGAGGTGCGCCAGAGTCCCGAGGGCTACCAGTCCGCGGTGGCGACCGGCTGGCCGAACAA GCGTGCCTACTTCCGCCAGAAGCGCGGCAGCAACGACGAGTACATCGAGGGCGAGGCCGAGCGCCTCGAGTACGACGGCC GCGGCGACACCGTGCGGCTCGTGAACCAGGCCGTGCTGCGGCGCTTCCGCGGCAGCACGCTGGCCGACGAAGTGGCCGGC AACACCATCTCCTACGACAACGTGACCGAGGTCTTCCAGGTGCTCGGCGGCCCGGCCTCCGCGGCCGCGCCAGGCCGGGT GCGCGGCGTGCTGACGCCGCGCGAGAACCCGGCTTCTGCGCCCAACTCCGGGGCGGGGACGCGGCCATGA
Upstream 100 bases:
>100_bases GCGGCTGACCCTCGTTTGGCGTCGACGCGACAGCGGCCGCCGGAGCGGCGGCCGGCCGTGGCAAGCGGTCGAACTCACCC TAGAATCGGCAGCAAGATTC
Downstream 100 bases:
>100_bases ACACGGCGATGGCGAGCCGCCTGGAGGCTCGCGGACTGCAGAAGAGCTACGGCGCCCGCAAGGTCGTCAAGGACGTGCAC CTGGCCGTTGCGGCCGGCGA
Product: OstA-like protein
Products: NA
Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Cell Envelope Biogenesis Protein YhbN; Alpha Amylase Domain-Containing Protein; Lipopolysaccharide Transport Periplasmic Protein Lpta; Protein YhbN; Exported Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPIPSMSAPTPYPASRCTLLAQPVCRAVLAVLGLALLPAFAAEKADRTQPLAFTADSARVDEVKQLNILSGNVEITKGSI VIRADRVEVRQSPEGYQSAVATGWPNKRAYFRQKRGSNDEYIEGEAERLEYDGRGDTVRLVNQAVLRRFRGSTLADEVAG NTISYDNVTEVFQVLGGPASAAAPGRVRGVLTPRENPASAPNSGAGTRP
Sequences:
>Translated_209_residues MPIPSMSAPTPYPASRCTLLAQPVCRAVLAVLGLALLPAFAAEKADRTQPLAFTADSARVDEVKQLNILSGNVEITKGSI VIRADRVEVRQSPEGYQSAVATGWPNKRAYFRQKRGSNDEYIEGEAERLEYDGRGDTVRLVNQAVLRRFRGSTLADEVAG NTISYDNVTEVFQVLGGPASAAAPGRVRGVLTPRENPASAPNSGAGTRP >Mature_208_residues PIPSMSAPTPYPASRCTLLAQPVCRAVLAVLGLALLPAFAAEKADRTQPLAFTADSARVDEVKQLNILSGNVEITKGSIV IRADRVEVRQSPEGYQSAVATGWPNKRAYFRQKRGSNDEYIEGEAERLEYDGRGDTVRLVNQAVLRRFRGSTLADEVAGN TISYDNVTEVFQVLGGPASAAAPGRVRGVLTPRENPASAPNSGAGTRP
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22351; Mature: 22220
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPSMSAPTPYPASRCTLLAQPVCRAVLAVLGLALLPAFAAEKADRTQPLAFTADSARV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH DEVKQLNILSGNVEITKGSIVIRADRVEVRQSPEGYQSAVATGWPNKRAYFRQKRGSNDE HHHHHHEEEECCEEEECCEEEEEECCCHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCC YIEGEAERLEYDGRGDTVRLVNQAVLRRFRGSTLADEVAGNTISYDNVTEVFQVLGGPAS EECCHHHHEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCC AAAPGRVRGVLTPRENPASAPNSGAGTRP CCCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIPSMSAPTPYPASRCTLLAQPVCRAVLAVLGLALLPAFAAEKADRTQPLAFTADSARV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH DEVKQLNILSGNVEITKGSIVIRADRVEVRQSPEGYQSAVATGWPNKRAYFRQKRGSNDE HHHHHHEEEECCEEEECCEEEEEECCCHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCC YIEGEAERLEYDGRGDTVRLVNQAVLRRFRGSTLADEVAGNTISYDNVTEVFQVLGGPAS EECCHHHHEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCC AAAPGRVRGVLTPRENPASAPNSGAGTRP CCCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA