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The map label for this gene is ssb [H]

Identifier: 124265304

GI number: 124265304

Start: 114289

End: 114810

Strand: Direct

Name: ssb [H]

Synonym: Mpe_A0111

Alternate gene names: 124265304

Gene position: 114289-114810 (Clockwise)

Preceding gene: 124265300

Following gene: 124265305

Centisome position: 2.83

GC content: 68.97

Gene sequence:

>522_bases
ATGGCCTCCATCAACAAAGTCATCCTGATCGGCAACCTGGGCCGCGACCCCGAGGTGCGCTACACGCCCAGCGGTTCGGC
GGTGTGCAACATCAGCCTTGCCACCACCCGCAACTGGAAGAGCAAGGACAGCGGCGACAAGGTCGAGGAGACCGAATGGC
ACCGCGTGGTGTTCTACGACCGCCTGGCCGAGATCGCCGGCGAGTACCTGAAGAAGGGCCGCCCGGTCTACGTCGAAGGC
CGCTTGAAGACCCGCAAGTGGCAGGACAAGGACGGCGCCGAGAAGTACACCACCGAGATCATTGCCGAGCAGATGCAGCT
GCTCGGGGGCCGCGAGGGCATGGGTGGCGGTGACGACGGCGGTGGCGGCGGCTATTCCCGGGGTGACGAAGGCGGCGGCG
AGGCCCCGCAGCGCGCGGCGCGCCCGCCGCAGCGACCGGCCGCCTCGCGCCAGGCGCCTGCACCGGCCCCGCAGAAGTCG
GCCACCGGCTTCGACGACATGGACGACGACATCCCGTTCTGA

Upstream 100 bases:

>100_bases
GGCCATCGGGGTGGCGGGCATAATCATCGGCCGCCCCGGATTCCCGGGCCGCGGACCCCTCCGAATCCCTTCTTTCTCCT
TACTGCGCGGGAGCAGCGGC

Downstream 100 bases:

>100_bases
CGCGTCCCCGGCGCACCGTCCCGCAGGGCCTGCAACCCGAGGTTGCCGGCCCTTTTTCAATGCGGCCCGGGGCCGCGCGT
TCCCCACATTCGGCGAAGGA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MASINKVILIGNLGRDPEVRYTPSGSAVCNISLATTRNWKSKDSGDKVEETEWHRVVFYDRLAEIAGEYLKKGRPVYVEG
RLKTRKWQDKDGAEKYTTEIIAEQMQLLGGREGMGGGDDGGGGGYSRGDEGGGEAPQRAARPPQRPAASRQAPAPAPQKS
ATGFDDMDDDIPF

Sequences:

>Translated_173_residues
MASINKVILIGNLGRDPEVRYTPSGSAVCNISLATTRNWKSKDSGDKVEETEWHRVVFYDRLAEIAGEYLKKGRPVYVEG
RLKTRKWQDKDGAEKYTTEIIAEQMQLLGGREGMGGGDDGGGGGYSRGDEGGGEAPQRAARPPQRPAASRQAPAPAPQKS
ATGFDDMDDDIPF
>Mature_172_residues
ASINKVILIGNLGRDPEVRYTPSGSAVCNISLATTRNWKSKDSGDKVEETEWHRVVFYDRLAEIAGEYLKKGRPVYVEGR
LKTRKWQDKDGAEKYTTEIIAEQMQLLGGREGMGGGDDGGGGGYSRGDEGGGEAPQRAARPPQRPAASRQAPAPAPQKSA
TGFDDMDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=37.1681415929204, Blast_Score=76, Evalue=1e-14,
Organism=Escherichia coli, GI1790494, Length=120, Percent_Identity=58.3333333333333, Blast_Score=153, Evalue=6e-39,
Organism=Drosophila melanogaster, GI85725234, Length=107, Percent_Identity=34.5794392523364, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24647376, Length=107, Percent_Identity=34.5794392523364, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18773; Mature: 18642

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASINKVILIGNLGRDPEVRYTPSGSAVCNISLATTRNWKSKDSGDKVEETEWHRVVFYD
CCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
RLAEIAGEYLKKGRPVYVEGRLKTRKWQDKDGAEKYTTEIIAEQMQLLGGREGMGGGDDG
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GGGGYSRGDEGGGEAPQRAARPPQRPAASRQAPAPAPQKSATGFDDMDDDIPF
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASINKVILIGNLGRDPEVRYTPSGSAVCNISLATTRNWKSKDSGDKVEETEWHRVVFYD
CCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
RLAEIAGEYLKKGRPVYVEGRLKTRKWQDKDGAEKYTTEIIAEQMQLLGGREGMGGGDDG
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GGGGYSRGDEGGGEAPQRAARPPQRPAASRQAPAPAPQKSATGFDDMDDDIPF
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]