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The map label for this gene is rfaL

Identifier: 124265256

GI number: 124265256

Start: 58085

End: 59680

Strand: Reverse

Name: rfaL

Synonym: Mpe_A0063

Alternate gene names: NA

Gene position: 59680-58085 (Counterclockwise)

Preceding gene: 124265257

Following gene: 124265254

Centisome position: 1.48

GC content: 68.05

Gene sequence:

>1596_bases
TTGATTGCTTCATCATGCGGTTCGGCACCGCCGTTGAACGGGGAGCATCAAGCAGCACGATGGGCCGCAACTCTGGCGTT
CGTTGTTTGCATCGTGTATTCCCTAGCGAGATTTGATGACGGTCAGGGCGGACCGTCGCTGGTGTTACTCGCAGCAAGCG
TAGCGCTGTTGGTCGCAAGCGGCAACGCCGGCCCGTGCAGTGCGCCGGCGATGGCCTGGGCCTGGTGGATCGCTGGAATG
GCCTGCGTGGCCGTGGCACTGGTGCAGTACTTTGCCCCGTCGCTGGCCAATGGCTGGCTGGTCGCCAACCCCGGTGCTGC
CGGTCGCGCCGTCGGCAACATGCGCCAACCCAACCATCTGGCCACCGCCCTGTTGTGCGCGATGGTCATGACTGCGTGGC
TTTGGCAGGCGGGTCGCCTGCGCGCGCCCTGGGCCGTCGCCTCGCTCTTCGCCATGGTGCTGGCGGTGGCGCTTAGCGCC
TCGCGGACCGGCGCGCTTTCGGTCGGCGTGCTGCTGCTGTGGGCCGCGGTCGATCGCACACTGCCGCGCGCCGCCCGATG
GACGCTCGCGCTGACGCCCGTGGTCTATCTCTTCTGCTGGGCCGGCCTGGCGGAGTACGCCGAGTGGCAGCAGGCCCATT
TCTACGGCGCCGAACGACTGCAGTCACACAGCGACATCAGCAGCTCCCGCTTCGCGATCTGGCGCAATGCGTTGACGCTG
ATCGCACAGAACCCGTGGACCGGCGTCGGCTGGGGCAACTTCAACTTCGCGTGGACCTTCACGCCCTTCCCGGACCGGCC
GGTCGCGTTCTTCGACCACACGCACAACCTGCCGCTGCAGCTCGCGGTCGAGATCGGCCTGCCGGCCACGGCCTTGGTGC
TGGGACTGTTCGGATGGGCCCTGTGGCGCGCACGCGGCGCGTGGCGGGTGGCGGGCGAACAGCCGGGCCATCCGGCGCGC
GCGGCTTTCGTGATGCTGGTGGTGCTGGGGGTGCACAGCCTGCTCGAGTACCCGCTGTGGTATGCCTACTTCCTGCTGCC
GGCAGCCTGGGCGCTGGGTGTGTTTCTCGGGTCGGCGCCGACGAAGGAGCCTGCCTCCGATCTGAATGAGCCGGCGAGTC
CGGCGGTCGCCATCATGGCGCGGTGGTCGACGTTCCTTCTGCGTGCGGCCGGTGCACTGATGATCGTCGGCGCCGCGTAT
GCCGCCTGGGATCACCGCCGCGTCGAGGTGATCTTCGCGCCGCCGGCCGGCGCCGGCCCGTTGGCGGAACGCATCGCCGC
CGGACGCGAGAGCGTGCTGTTCGGCTATCACGCCGACTACGCCGCCGTGACCAACGAGCCGAAGGATCAGGCGCTTGCAA
GCTTTCGCCGTCCGCTGCACCACCTGGTCGATGTGCGTCTGCTCATCGCGTACGTCGAGGCGCTGAAGGCCAATGGTCGC
GATGCCGAGGCGCTGTACGCAGCCCAGCGATTGCGAGAATTTCGGCGCGAAGACGCGCAGGCCTACTTCAAGAATTGCAC
GGCCGACAACCCGGTGCCGCCCTTCCAGTGCCGAACCGATCCGGTAGCGCTGACCTGGCGCGACCTGGAGCCTTGA

Upstream 100 bases:

>100_bases
CAGTGTCTCTCTTCCCTTGCTACTCGCGCCAGCAACGGTTCCGGACTCGGTGTTCTACAACCAGATTGTCGGAACAGCTG
GATGGGGGCTGTGCGTGCTG

Downstream 100 bases:

>100_bases
GCCGGGGGGCGCCGTCAGCCCGCGGTGTCGGCCACGAACGAACCCGACTTGCCGCCATGCTTCTCGAGCAGCCGCACGCC
CTCGATCACCATGCCCCGGT

Product: O-antigen polymerase

Products: NA

Alternate protein names: Lipid A Core; O-Antigen Polymerase Family Protein; O-Antigen Ligase; Lipopolysaccharide Biosynthesis Protein; O-Antigen Polymerase Family; O-Antigen Ligase And Related S

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MIASSCGSAPPLNGEHQAARWAATLAFVVCIVYSLARFDDGQGGPSLVLLAASVALLVASGNAGPCSAPAMAWAWWIAGM
ACVAVALVQYFAPSLANGWLVANPGAAGRAVGNMRQPNHLATALLCAMVMTAWLWQAGRLRAPWAVASLFAMVLAVALSA
SRTGALSVGVLLLWAAVDRTLPRAARWTLALTPVVYLFCWAGLAEYAEWQQAHFYGAERLQSHSDISSSRFAIWRNALTL
IAQNPWTGVGWGNFNFAWTFTPFPDRPVAFFDHTHNLPLQLAVEIGLPATALVLGLFGWALWRARGAWRVAGEQPGHPAR
AAFVMLVVLGVHSLLEYPLWYAYFLLPAAWALGVFLGSAPTKEPASDLNEPASPAVAIMARWSTFLLRAAGALMIVGAAY
AAWDHRRVEVIFAPPAGAGPLAERIAAGRESVLFGYHADYAAVTNEPKDQALASFRRPLHHLVDVRLLIAYVEALKANGR
DAEALYAAQRLREFRREDAQAYFKNCTADNPVPPFQCRTDPVALTWRDLEP

Sequences:

>Translated_531_residues
MIASSCGSAPPLNGEHQAARWAATLAFVVCIVYSLARFDDGQGGPSLVLLAASVALLVASGNAGPCSAPAMAWAWWIAGM
ACVAVALVQYFAPSLANGWLVANPGAAGRAVGNMRQPNHLATALLCAMVMTAWLWQAGRLRAPWAVASLFAMVLAVALSA
SRTGALSVGVLLLWAAVDRTLPRAARWTLALTPVVYLFCWAGLAEYAEWQQAHFYGAERLQSHSDISSSRFAIWRNALTL
IAQNPWTGVGWGNFNFAWTFTPFPDRPVAFFDHTHNLPLQLAVEIGLPATALVLGLFGWALWRARGAWRVAGEQPGHPAR
AAFVMLVVLGVHSLLEYPLWYAYFLLPAAWALGVFLGSAPTKEPASDLNEPASPAVAIMARWSTFLLRAAGALMIVGAAY
AAWDHRRVEVIFAPPAGAGPLAERIAAGRESVLFGYHADYAAVTNEPKDQALASFRRPLHHLVDVRLLIAYVEALKANGR
DAEALYAAQRLREFRREDAQAYFKNCTADNPVPPFQCRTDPVALTWRDLEP
>Mature_531_residues
MIASSCGSAPPLNGEHQAARWAATLAFVVCIVYSLARFDDGQGGPSLVLLAASVALLVASGNAGPCSAPAMAWAWWIAGM
ACVAVALVQYFAPSLANGWLVANPGAAGRAVGNMRQPNHLATALLCAMVMTAWLWQAGRLRAPWAVASLFAMVLAVALSA
SRTGALSVGVLLLWAAVDRTLPRAARWTLALTPVVYLFCWAGLAEYAEWQQAHFYGAERLQSHSDISSSRFAIWRNALTL
IAQNPWTGVGWGNFNFAWTFTPFPDRPVAFFDHTHNLPLQLAVEIGLPATALVLGLFGWALWRARGAWRVAGEQPGHPAR
AAFVMLVVLGVHSLLEYPLWYAYFLLPAAWALGVFLGSAPTKEPASDLNEPASPAVAIMARWSTFLLRAAGALMIVGAAY
AAWDHRRVEVIFAPPAGAGPLAERIAAGRESVLFGYHADYAAVTNEPKDQALASFRRPLHHLVDVRLLIAYVEALKANGR
DAEALYAAQRLREFRREDAQAYFKNCTADNPVPPFQCRTDPVALTWRDLEP

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57431; Mature: 57431

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASSCGSAPPLNGEHQAARWAATLAFVVCIVYSLARFDDGQGGPSLVLLAASVALLVAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEC
GNAGPCSAPAMAWAWWIAGMACVAVALVQYFAPSLANGWLVANPGAAGRAVGNMRQPNHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCCCHHH
ATALLCAMVMTAWLWQAGRLRAPWAVASLFAMVLAVALSASRTGALSVGVLLLWAAVDRT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LPRAARWTLALTPVVYLFCWAGLAEYAEWQQAHFYGAERLQSHSDISSSRFAIWRNALTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IAQNPWTGVGWGNFNFAWTFTPFPDRPVAFFDHTHNLPLQLAVEIGLPATALVLGLFGWA
HCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHH
LWRARGAWRVAGEQPGHPARAAFVMLVVLGVHSLLEYPLWYAYFLLPAAWALGVFLGSAP
HHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TKEPASDLNEPASPAVAIMARWSTFLLRAAGALMIVGAAYAAWDHRRVEVIFAPPAGAGP
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
LAERIAAGRESVLFGYHADYAAVTNEPKDQALASFRRPLHHLVDVRLLIAYVEALKANGR
HHHHHHCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAEALYAAQRLREFRREDAQAYFKNCTADNPVPPFQCRTDPVALTWRDLEP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MIASSCGSAPPLNGEHQAARWAATLAFVVCIVYSLARFDDGQGGPSLVLLAASVALLVAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEC
GNAGPCSAPAMAWAWWIAGMACVAVALVQYFAPSLANGWLVANPGAAGRAVGNMRQPNHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCCCHHH
ATALLCAMVMTAWLWQAGRLRAPWAVASLFAMVLAVALSASRTGALSVGVLLLWAAVDRT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LPRAARWTLALTPVVYLFCWAGLAEYAEWQQAHFYGAERLQSHSDISSSRFAIWRNALTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IAQNPWTGVGWGNFNFAWTFTPFPDRPVAFFDHTHNLPLQLAVEIGLPATALVLGLFGWA
HCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHH
LWRARGAWRVAGEQPGHPARAAFVMLVVLGVHSLLEYPLWYAYFLLPAAWALGVFLGSAP
HHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TKEPASDLNEPASPAVAIMARWSTFLLRAAGALMIVGAAYAAWDHRRVEVIFAPPAGAGP
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
LAERIAAGRESVLFGYHADYAAVTNEPKDQALASFRRPLHHLVDVRLLIAYVEALKANGR
HHHHHHCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAEALYAAQRLREFRREDAQAYFKNCTADNPVPPFQCRTDPVALTWRDLEP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA