Click here to switch to the map view.

The map label for this gene is fimB [H]

Identifier: 124265254

GI number: 124265254

Start: 56647

End: 57447

Strand: Reverse

Name: fimB [H]

Synonym: Mpe_A0061

Alternate gene names: 124265254

Gene position: 57447-56647 (Counterclockwise)

Preceding gene: 124265256

Following gene: 124265253

Centisome position: 1.42

GC content: 64.04

Gene sequence:

>801_bases
ATGGACCAGTCTTTCCCTTCTCCCGCCTCGCCGCCCCCGGCGCAGCGCTTCTCGCTCGGTCCTCGGCTGCGTGCCGCCGG
CATCCACCTTGGCTTGAGCGCGGTGATCGCAGCCCTTGCCGCGGCACTCGTGTTCGGGCTCTGGTACCCCACGCCGTTCC
GTGAGATCTCCGGCGGGCGCGAGTTGTTCTTTATCGTCGTGGCCGTCGATGTGGTGCTGGGCCCGTTGATCACTTTCGCC
GTATTCGATCGGCGCAAGCCGTGGCGCGAGCTGCGGCGCGATCTAGCCATCGTCGGGATCATACAAATTGCGGGCCTGCT
GTACGGGTTGCATACGGTTTACGTGGCGCGCCCAGCGGTCATGGTCCTCGAGGTGGATCGGCTTCGAGTCCTCACTGCCG
TTGACCTCCCTGCGGCAGAGCTTGCCAAGGCCCCACCAGAGTTCAGGGATTTGCCTTGGCACGGGATCCATGTGCTGGCC
GCGCGCCGAGCCACGGATGCAGAACGCCTCGAATCTATCGAAATGGCCATGGCCGGCGTCGATATCGGTCAGCGCCCGGA
GTTCTGGCTGCCGGCGTCCGAAACGAAGGCCGCATTGCTTCAAAGCGCAAAACCTCTCTCCGAACTGCGAAAGCGCCACA
TCACGCGATCCGCCGAACTGCAGAAGTACATTGCCGCAACTGGCAGCAGCGACGAGCAACTGAAGTTCCTCCCCCTGTTC
GCGCGCCGTGCCGACTGGGTCGCATTACTCGACGCCGGCAGCGGCGAACTGGTGGGCTATGCGCCTTTCGATGGCTTCTG
A

Upstream 100 bases:

>100_bases
GCAACAATGGGAAACAAGGCTGCGGCATCATAGACGCACGCCTTGCTGAACTGCCTTGCTGCGCGAAGGTCACACCCGAG
ACCCGCCGCCGACCTGCCCG

Downstream 100 bases:

>100_bases
CCGACGCCGCCGCTGGCCGCGTGCTCTGCCGCTGGCCTTGAGCCTGGCCCTTGCCGCACAAGGCCTGGCGCCCGCCGCCC
TGGCGCAGCAGGGCAGTCCT

Product: fimbrial assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDQSFPSPASPPPAQRFSLGPRLRAAGIHLGLSAVIAALAAALVFGLWYPTPFREISGGRELFFIVVAVDVVLGPLITFA
VFDRRKPWRELRRDLAIVGIIQIAGLLYGLHTVYVARPAVMVLEVDRLRVLTAVDLPAAELAKAPPEFRDLPWHGIHVLA
ARRATDAERLESIEMAMAGVDIGQRPEFWLPASETKAALLQSAKPLSELRKRHITRSAELQKYIAATGSSDEQLKFLPLF
ARRADWVALLDAGSGELVGYAPFDGF

Sequences:

>Translated_266_residues
MDQSFPSPASPPPAQRFSLGPRLRAAGIHLGLSAVIAALAAALVFGLWYPTPFREISGGRELFFIVVAVDVVLGPLITFA
VFDRRKPWRELRRDLAIVGIIQIAGLLYGLHTVYVARPAVMVLEVDRLRVLTAVDLPAAELAKAPPEFRDLPWHGIHVLA
ARRATDAERLESIEMAMAGVDIGQRPEFWLPASETKAALLQSAKPLSELRKRHITRSAELQKYIAATGSSDEQLKFLPLF
ARRADWVALLDAGSGELVGYAPFDGF
>Mature_266_residues
MDQSFPSPASPPPAQRFSLGPRLRAAGIHLGLSAVIAALAAALVFGLWYPTPFREISGGRELFFIVVAVDVVLGPLITFA
VFDRRKPWRELRRDLAIVGIIQIAGLLYGLHTVYVARPAVMVLEVDRLRVLTAVDLPAAELAKAPPEFRDLPWHGIHVLA
ARRATDAERLESIEMAMAGVDIGQRPEFWLPASETKAALLQSAKPLSELRKRHITRSAELQKYIAATGSSDEQLKFLPLF
ARRADWVALLDAGSGELVGYAPFDGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29152; Mature: 29152

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSFPSPASPPPAQRFSLGPRLRAAGIHLGLSAVIAALAAALVFGLWYPTPFREISGGR
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
ELFFIVVAVDVVLGPLITFAVFDRRKPWRELRRDLAIVGIIQIAGLLYGLHTVYVARPAV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
MVLEVDRLRVLTAVDLPAAELAKAPPEFRDLPWHGIHVLAARRATDAERLESIEMAMAGV
EEEEHHHHHEEHHCCCCHHHHHCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
DIGQRPEFWLPASETKAALLQSAKPLSELRKRHITRSAELQKYIAATGSSDEQLKFLPLF
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHH
ARRADWVALLDAGSGELVGYAPFDGF
HCCCCEEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure
MDQSFPSPASPPPAQRFSLGPRLRAAGIHLGLSAVIAALAAALVFGLWYPTPFREISGGR
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
ELFFIVVAVDVVLGPLITFAVFDRRKPWRELRRDLAIVGIIQIAGLLYGLHTVYVARPAV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
MVLEVDRLRVLTAVDLPAAELAKAPPEFRDLPWHGIHVLAARRATDAERLESIEMAMAGV
EEEEHHHHHEEHHCCCCHHHHHCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
DIGQRPEFWLPASETKAALLQSAKPLSELRKRHITRSAELQKYIAATGSSDEQLKFLPLF
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHH
ARRADWVALLDAGSGELVGYAPFDGF
HCCCCEEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675418 [H]