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The map label for this gene is 124265238

Identifier: 124265238

GI number: 124265238

Start: 43073

End: 43552

Strand: Direct

Name: 124265238

Synonym: Mpe_A0045

Alternate gene names: NA

Gene position: 43073-43552 (Clockwise)

Preceding gene: 124265234

Following gene: 124265242

Centisome position: 1.07

GC content: 72.92

Gene sequence:

>480_bases
ATGCCGCGCATCAGCGCGAACGTCCCCGCCGCAGAAACCCGCGCCGTCCCGCCGCGCGCCAAGGGCGTGCCGGCCGATCC
GCAGAAGTTCGCCGTCAGCGTGCGGCCCAGTCGGATCGACGGCCAGGGCGCGTTCGCCGCCGAGGCCATTCCGGCGCGCC
GCAAGATCGGCGAGATCCGCGGCGAATCGATCAGCGTGCGCGAGGCGCGCCGCCGCGCCAGAGGCCAGGCCCGCATCATG
ATCGTCGAGGTGTCCGAGCGGCGGGCGATCGACGCCTCGCAGTCGGCCGATCCGCTGCGCTTCACCAACCACTCCTGCGC
GCCCAACGCGTCGCTGCGCATCCGCCAGGGGCGCGTGGAGTTCTACGCCATGCGCGACATCGCGGTCGGTGAGGAGCTCT
GCGTCGACTACGGCGAGAGCCACCACGAAGGCCGGCTGCGCTGTCGCTGCGGCGCGCCGAACTGCGCGGGGCGACTTTGA

Upstream 100 bases:

>100_bases
AAGCGGGCCTTCGCCGGGTCAGTTCTCCACCCTGCCGCCTGCGAACGTGACATCCGACGCGCGCTTTGGAAGCGCGCTGA
CTTGACGCGACAATCGATCC

Downstream 100 bases:

>100_bases
TGTGGGCCCCCGGCTGCGGCGTACCGCAGCCTGCCCCCGAGGGGGCGCCCGGCCGGCTTGGGGCGGCCCGGCGCTCGGTC
GGGTGGGTGCCTACGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Set Domain Protein; SET Domain-Containing Protein; SET Domain Protein; Setd1a Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPRISANVPAAETRAVPPRAKGVPADPQKFAVSVRPSRIDGQGAFAAEAIPARRKIGEIRGESISVREARRRARGQARIM
IVEVSERRAIDASQSADPLRFTNHSCAPNASLRIRQGRVEFYAMRDIAVGEELCVDYGESHHEGRLRCRCGAPNCAGRL

Sequences:

>Translated_159_residues
MPRISANVPAAETRAVPPRAKGVPADPQKFAVSVRPSRIDGQGAFAAEAIPARRKIGEIRGESISVREARRRARGQARIM
IVEVSERRAIDASQSADPLRFTNHSCAPNASLRIRQGRVEFYAMRDIAVGEELCVDYGESHHEGRLRCRCGAPNCAGRL
>Mature_158_residues
PRISANVPAAETRAVPPRAKGVPADPQKFAVSVRPSRIDGQGAFAAEAIPARRKIGEIRGESISVREARRRARGQARIMI
VEVSERRAIDASQSADPLRFTNHSCAPNASLRIRQGRVEFYAMRDIAVGEELCVDYGESHHEGRLRCRCGAPNCAGRL

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI210032580, Length=132, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=5e-13,
Organism=Homo sapiens, GI55741677, Length=132, Percent_Identity=31.0606060606061, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193210440, Length=138, Percent_Identity=35.5072463768116, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321911, Length=135, Percent_Identity=39.2592592592593, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24639197, Length=133, Percent_Identity=36.8421052631579, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571451, Length=133, Percent_Identity=36.8421052631579, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17400; Mature: 17269

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRISANVPAAETRAVPPRAKGVPADPQKFAVSVRPSRIDGQGAFAAEAIPARRKIGEIR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCEECCCCCCHHHHCHHHHHHHHHC
GESISVREARRRARGQARIMIVEVSERRAIDASQSADPLRFTNHSCAPNASLRIRQGRVE
CCEECHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEE
FYAMRDIAVGEELCVDYGESHHEGRLRCRCGAPNCAGRL
EEEEECHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PRISANVPAAETRAVPPRAKGVPADPQKFAVSVRPSRIDGQGAFAAEAIPARRKIGEIR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCEECCCCCCHHHHCHHHHHHHHHC
GESISVREARRRARGQARIMIVEVSERRAIDASQSADPLRFTNHSCAPNASLRIRQGRVE
CCEECHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEE
FYAMRDIAVGEELCVDYGESHHEGRLRCRCGAPNCAGRL
EEEEECHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA