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The map label for this gene is acaC [H]

Identifier: 124028376

GI number: 124028376

Start: 1536588

End: 1537013

Strand: Direct

Name: acaC [H]

Synonym: Hbut_1529

Alternate gene names: 124028376

Gene position: 1536588-1537013 (Clockwise)

Preceding gene: 124028375

Following gene: 124028378

Centisome position: 92.17

GC content: 54.46

Gene sequence:

>426_bases
ATGACCATAAGCATGCACATATCCCCGGCTAGGATATGGCGTGAGCGAATCTACAGGTACAGACTTGTTGGCAGGAAGTG
CCTCAAGTGCGGCCGTACACACTATCCACCAAGGCCAGCATGCCCTCACTGCGGCTCTCGCGACCTGAAAGAGGTTGAAC
TACCGAGGACCGGCGTACTGGAGACCTATACGGTGATATACACTGTTATGGATGGGTTTAGAGAGAAGGCACCCCTAGTG
ATAGGCATAGTCAGGCTAGACGATGGCACCCGTGTGCTCGCACCGATAACAGATGTCGAGCCCTCCGAGGTTAAGACTGG
CATGCGTGTCGAAGCGGTGCTAAGGAGGATAAGAAAAGACGGAGAGGACGGCTTGATAGGCTACGGTACTGCTTTCCGCC
CAGTACTCTCCGCGAAAACCAGCTAG

Upstream 100 bases:

>100_bases
GAGGTAGGCTTAGCAGTTAACGTTGGTGGCGACGGCTCGACGGTTTCAGCCCTAGTCCTCAGACGCGCCTAGCCCATATC
ACTGTGAAGGGTGTATATCC

Downstream 100 bases:

>100_bases
CAGCCACCATACCGTCTTGTTTTTACCTCTCCCAGGTCCCATCCTACCCCTCGCCTAGCAGTTCCTCGGCCTCCTTTGCG
CCCTCCTCCAGCTCCCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTISMHISPARIWRERIYRYRLVGRKCLKCGRTHYPPRPACPHCGSRDLKEVELPRTGVLETYTVIYTVMDGFREKAPLV
IGIVRLDDGTRVLAPITDVEPSEVKTGMRVEAVLRRIRKDGEDGLIGYGTAFRPVLSAKTS

Sequences:

>Translated_141_residues
MTISMHISPARIWRERIYRYRLVGRKCLKCGRTHYPPRPACPHCGSRDLKEVELPRTGVLETYTVIYTVMDGFREKAPLV
IGIVRLDDGTRVLAPITDVEPSEVKTGMRVEAVLRRIRKDGEDGLIGYGTAFRPVLSAKTS
>Mature_140_residues
TISMHISPARIWRERIYRYRLVGRKCLKCGRTHYPPRPACPHCGSRDLKEVELPRTGVLETYTVIYTVMDGFREKAPLVI
GIVRLDDGTRVLAPITDVEPSEVKTGMRVEAVLRRIRKDGEDGLIGYGTAFRPVLSAKTS

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15956; Mature: 15825

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISMHISPARIWRERIYRYRLVGRKCLKCGRTHYPPRPACPHCGSRDLKEVELPRTGVL
CEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHH
ETYTVIYTVMDGFREKAPLVIGIVRLDDGTRVLAPITDVEPSEVKTGMRVEAVLRRIRKD
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHC
GEDGLIGYGTAFRPVLSAKTS
CCCCEEECCCHHHHHHHCCCC
>Mature Secondary Structure 
TISMHISPARIWRERIYRYRLVGRKCLKCGRTHYPPRPACPHCGSRDLKEVELPRTGVL
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHH
ETYTVIYTVMDGFREKAPLVIGIVRLDDGTRVLAPITDVEPSEVKTGMRVEAVLRRIRKD
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHC
GEDGLIGYGTAFRPVLSAKTS
CCCCEEECCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425 [H]