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The map label for this gene is yigC [C]

Identifier: 124028299

GI number: 124028299

Start: 1457058

End: 1458515

Strand: Reverse

Name: yigC [C]

Synonym: Hbut_1450

Alternate gene names: 124028299

Gene position: 1458515-1457058 (Counterclockwise)

Preceding gene: 124028300

Following gene: 124028294

Centisome position: 87.48

GC content: 59.88

Gene sequence:

>1458_bases
GTGCAGGCTCCACGTGACCTCCGGGAATTCCTCGAGGTGCTCGAGGAGAGGGGAGAGCTGCGCAGGATCCGGGAGCCGCT
AAGCCCGGTGCTTGAAATACCTGCGGTGCTCCGCCGGGTTATGGAGCGGCGTGGCCCAGCTCTCCTCTTCGAGAACGTAA
AGGGTTACCCTGGCTGGCGTGTTGCGGGCAACATATTCGGCTCCTTGGAGAGGATAAAGCTAGCCCTTGGCGTGGAGAAC
CTTGAGGAGATAGGGTGGAGGCTCGTCTCCCAGGCCTGGCGCCAGCCGCCGATGACCCTTGGAGGTAAGCTGCGCAGCCT
AAAGGAGGTAATGGATCTGGGTCGTTATACGCCACGGCTGGTGCGCCGTGCAGCCTTCCAGGAAACAGTCGTTGAGGGTG
AGAAGGTTGATGTATCGTCGATACCAGCGTTTAAGTCCTGGCCACGCGACGGAGGCCGCTACATAACCTTTGGCCAAGTC
TACACAGTAGATCCCGCCACTGGTGTAACGAACATAGGCGTGTACCGGGTGATGCTCAGGCCGCCGCGGGAGCTGGTTAT
CCACTGGCAGCTCCACAAGAGGGGACGCCATGCATATCTTGAAGCCGCGAAGCGTGGCGAGCCCCTACCCGTAGCAGTGG
TGGTGGGCTCGGACCCGGCTGCAATGCTGGCGGGCGTCATGCCGGTACCCTATCCGCTCGACAAGCTGCTCTTCGCTGGT
GTCATGGCTGGCCGCGGCGTAGAGGTATACCGGCTGCCCAATGGCGTCCCTGTCCCAGCATCCTCGGAGCTAGTCCTGGA
GGGCTACGTGGAGCCCGGCAGGCTTTCCGAGGAGGGCCCCTTTGGCGACCACTGGGGCTACTATGACAAGCCCACGGAGA
AGTTCCCCGTAATGACCGTGGAGAGGATGTGGATCCGAAGCAACCCGGTGTATGTGGGCACGGTTGTGGGTAAGCCAGTG
CTAGAGGACGCCTATATAGGCAAGGCTGTCGAGAGGATATTCCTACCAGTAATCCGTACCCTACTCCCAGAAGTAGTAGA
CATAAACATGCCGGAGTACGGAGTCTTCCAGGGCGTAGCGATAGTCTCGATAAGGAAGACCTACCCGGGCCAGGCAAAGA
AGGTCATGATGGCCCTGTGGGGCCTAGGCCAGATGGCGCTAACCAAGATAATCATAGTGGTTGACGAGGACATAAACGTT
CACGATCTCAACCAGGTGCTATGGGCGGTAGCAGCGCACGTGGACCCCCAGCGCGACGTCGTAGTGGTACCTGGCACCCA
TACAGACCAGCTAGACCCAGCAACCCCAGTACCAGGCTACGGCAGCAAGCTAGGCATAGATGCAACCAGGAAGCTCCCCG
AGGAGTATGGGGGGAAGGCTTGGCCAGAGGAAGTCGAGCCCGACCCCCAGGTAGAGGAGGAAGCTGCAAAAGTGCTAGAA
AAGCTAGGCCTGGCTTAG

Upstream 100 bases:

>100_bases
AGCAGTAGTTGATCTGCGAGATGTGCCGCCGGGGGAGAGGCCAGCAGCTCTATACGAGGCCCTGAGCAGGGCTGCGAGGC
GTAGGGAGGGCTAGAGGGCT

Downstream 100 bases:

>100_bases
CCCGGACGTATATCTTTGCCCAGTCCAGCTCCAGGCACACCCTTTCGCGAACCTTCTGCGTGACATGCCTATAGACCATC
ACAGCATCCCGCCCCGGCCA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MQAPRDLREFLEVLEERGELRRIREPLSPVLEIPAVLRRVMERRGPALLFENVKGYPGWRVAGNIFGSLERIKLALGVEN
LEEIGWRLVSQAWRQPPMTLGGKLRSLKEVMDLGRYTPRLVRRAAFQETVVEGEKVDVSSIPAFKSWPRDGGRYITFGQV
YTVDPATGVTNIGVYRVMLRPPRELVIHWQLHKRGRHAYLEAAKRGEPLPVAVVVGSDPAAMLAGVMPVPYPLDKLLFAG
VMAGRGVEVYRLPNGVPVPASSELVLEGYVEPGRLSEEGPFGDHWGYYDKPTEKFPVMTVERMWIRSNPVYVGTVVGKPV
LEDAYIGKAVERIFLPVIRTLLPEVVDINMPEYGVFQGVAIVSIRKTYPGQAKKVMMALWGLGQMALTKIIIVVDEDINV
HDLNQVLWAVAAHVDPQRDVVVVPGTHTDQLDPATPVPGYGSKLGIDATRKLPEEYGGKAWPEEVEPDPQVEEEAAKVLE
KLGLA

Sequences:

>Translated_485_residues
MQAPRDLREFLEVLEERGELRRIREPLSPVLEIPAVLRRVMERRGPALLFENVKGYPGWRVAGNIFGSLERIKLALGVEN
LEEIGWRLVSQAWRQPPMTLGGKLRSLKEVMDLGRYTPRLVRRAAFQETVVEGEKVDVSSIPAFKSWPRDGGRYITFGQV
YTVDPATGVTNIGVYRVMLRPPRELVIHWQLHKRGRHAYLEAAKRGEPLPVAVVVGSDPAAMLAGVMPVPYPLDKLLFAG
VMAGRGVEVYRLPNGVPVPASSELVLEGYVEPGRLSEEGPFGDHWGYYDKPTEKFPVMTVERMWIRSNPVYVGTVVGKPV
LEDAYIGKAVERIFLPVIRTLLPEVVDINMPEYGVFQGVAIVSIRKTYPGQAKKVMMALWGLGQMALTKIIIVVDEDINV
HDLNQVLWAVAAHVDPQRDVVVVPGTHTDQLDPATPVPGYGSKLGIDATRKLPEEYGGKAWPEEVEPDPQVEEEAAKVLE
KLGLA
>Mature_485_residues
MQAPRDLREFLEVLEERGELRRIREPLSPVLEIPAVLRRVMERRGPALLFENVKGYPGWRVAGNIFGSLERIKLALGVEN
LEEIGWRLVSQAWRQPPMTLGGKLRSLKEVMDLGRYTPRLVRRAAFQETVVEGEKVDVSSIPAFKSWPRDGGRYITFGQV
YTVDPATGVTNIGVYRVMLRPPRELVIHWQLHKRGRHAYLEAAKRGEPLPVAVVVGSDPAAMLAGVMPVPYPLDKLLFAG
VMAGRGVEVYRLPNGVPVPASSELVLEGYVEPGRLSEEGPFGDHWGYYDKPTEKFPVMTVERMWIRSNPVYVGTVVGKPV
LEDAYIGKAVERIFLPVIRTLLPEVVDINMPEYGVFQGVAIVSIRKTYPGQAKKVMMALWGLGQMALTKIIIVVDEDINV
HDLNQVLWAVAAHVDPQRDVVVVPGTHTDQLDPATPVPGYGSKLGIDATRKLPEEYGGKAWPEEVEPDPQVEEEAAKVLE
KLGLA

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=490, Percent_Identity=40.8163265306122, Blast_Score=347, Evalue=1e-96,
Organism=Saccharomyces cerevisiae, GI6320748, Length=446, Percent_Identity=26.0089686098655, Blast_Score=110, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 54000; Mature: 54000

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPRDLREFLEVLEERGELRRIREPLSPVLEIPAVLRRVMERRGPALLFENVKGYPGWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE
VAGNIFGSLERIKLALGVENLEEIGWRLVSQAWRQPPMTLGGKLRSLKEVMDLGRYTPRL
EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
VRRAAFQETVVEGEKVDVSSIPAFKSWPRDGGRYITFGQVYTVDPATGVTNIGVYRVMLR
HHHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCEEEECEEEEECCCCCCCCCCEEEEEEC
PPRELVIHWQLHKRGRHAYLEAAKRGEPLPVAVVVGSDPAAMLAGVMPVPYPLDKLLFAG
CCHHHEEEEEHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHH
VMAGRGVEVYRLPNGVPVPASSELVLEGYVEPGRLSEEGPFGDHWGYYDKPTEKFPVMTV
HHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEH
ERMWIRSNPVYVGTVVGKPVLEDAYIGKAVERIFLPVIRTLLPEVVDINMPEYGVFQGVA
HHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEE
IVSIRKTYPGQAKKVMMALWGLGQMALTKIIIVVDEDINVHDLNQVLWAVAAHVDPQRDV
EEEEECCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCE
VVVPGTHTDQLDPATPVPGYGSKLGIDATRKLPEEYGGKAWPEEVEPDPQVEEEAAKVLE
EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KLGLA
HHCCC
>Mature Secondary Structure
MQAPRDLREFLEVLEERGELRRIREPLSPVLEIPAVLRRVMERRGPALLFENVKGYPGWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE
VAGNIFGSLERIKLALGVENLEEIGWRLVSQAWRQPPMTLGGKLRSLKEVMDLGRYTPRL
EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
VRRAAFQETVVEGEKVDVSSIPAFKSWPRDGGRYITFGQVYTVDPATGVTNIGVYRVMLR
HHHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCEEEECEEEEECCCCCCCCCCEEEEEEC
PPRELVIHWQLHKRGRHAYLEAAKRGEPLPVAVVVGSDPAAMLAGVMPVPYPLDKLLFAG
CCHHHEEEEEHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHH
VMAGRGVEVYRLPNGVPVPASSELVLEGYVEPGRLSEEGPFGDHWGYYDKPTEKFPVMTV
HHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEH
ERMWIRSNPVYVGTVVGKPVLEDAYIGKAVERIFLPVIRTLLPEVVDINMPEYGVFQGVA
HHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEE
IVSIRKTYPGQAKKVMMALWGLGQMALTKIIIVVDEDINVHDLNQVLWAVAAHVDPQRDV
EEEEECCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCE
VVVPGTHTDQLDPATPVPGYGSKLGIDATRKLPEEYGGKAWPEEVEPDPQVEEEAAKVLE
EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KLGLA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]