| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124028290
Identifier: 124028290
GI number: 124028290
Start: 1447335
End: 1448408
Strand: Direct
Name: 124028290
Synonym: Hbut_1441
Alternate gene names: NA
Gene position: 1447335-1448408 (Clockwise)
Preceding gene: 124028284
Following gene: 124028293
Centisome position: 86.81
GC content: 55.4
Gene sequence:
>1074_bases GTGGCTAGTGGGAGTAACAGCTTCTTCCCCCTTGCTGAGGGTGCAGCTGAGGCTGCCTCAGCTAGGCGCCCGGAGACCAG GGATATTGTTCGCCGGCTGGGCGTCATACCGCCGGAGAGGATAACGATTACGAACTATCCCGTGGCGCGCCCACTAGCGG TATTCAATGCCGCGCTAAGCGTCGAGGAGGACAACGCAAGGATATACGCGAGAATAATAATGGGCTATTACCTCTACATC TCAGCTATAGCTGAGATAAACATACCCCTCGAGGACATCAATGATGGTAGTGTGGGTTGGCGCAACTACGCTGCGGCCAT AGTTGTTTACCCGTCAACACGCTACGATGTATGGGGCACCGAGGACCCGAGAGTATTCAGGCTCGACGAAAAACTATACA TGGTTTATACAGGTAGAACAGTCAACTACTTCAGGCAAGGCGCGGAGAGGGAGCGCACCCTCCCCGTCGCAGCAGTAATG GAGGAGAATGGCTGGACGAAAAAGGCGGTATTCGTGCTACCCCCGGGGCTCCGAAGGCATCTTATAAGCGATAAGAACGC CTTCCTCGTGAGGGTCGGCGGCGACCTCCTGCTATTCCACAGGCCGCACATGGACGACAATAGGTTCTACCTCGCAGTGA GTAAGGTTGAAGAGCTCCCGCATACGTGCAGTAGCGGTATCTGCGAGATCGAGGTTAGGGATACTGTTTGGGTTCTACCG CAGGCACCCTTTGAGACAAAGATTGGCTGGGCAACACCGCCAGTCGATGTGGCAGGAGACACCGTGATAGCCCTAGCACA TGGCGTCGACCGTGAAATTGGCGTTTACCGCGTCTTCGCGGTTAAGCTACGCTACAGCCGGAAAAGGGGCATCACAGTGG AATCCGTGACCCCAACATACATCATGGAGCCCAGGGAGATATACGAGGTGTACGGCGACAGGCCCTACACCATATTCCCC TGCGGCGCCTGGAGAGTAGACCGCGACACCGTACTGCTAACCTATGGCGCAGGAGACTACGTAGTCGGAATAGGCTCCCT CAACATCAACGAACTCATAGATATGCTCGAGTAG
Upstream 100 bases:
>100_bases CGGCGCACCAATGCTTAAGCCTCCAAGCCGCCTGGTAGGTGGCCAGCTTAGGGGTTATAGGCTGCCAGCCGCACTAGCAG CACAGCAGGATTGATAAGCC
Downstream 100 bases:
>100_bases CCCCGGAAACTCGAAACAATAAAGTCATTTGTGCACAGGGACTACGCATCGGTCAGCATCGACGTCTGGTACCAGTATCT TAAACTTAATGATAGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MASGSNSFFPLAEGAAEAASARRPETRDIVRRLGVIPPERITITNYPVARPLAVFNAALSVEEDNARIYARIIMGYYLYI SAIAEINIPLEDINDGSVGWRNYAAAIVVYPSTRYDVWGTEDPRVFRLDEKLYMVYTGRTVNYFRQGAERERTLPVAAVM EENGWTKKAVFVLPPGLRRHLISDKNAFLVRVGGDLLLFHRPHMDDNRFYLAVSKVEELPHTCSSGICEIEVRDTVWVLP QAPFETKIGWATPPVDVAGDTVIALAHGVDREIGVYRVFAVKLRYSRKRGITVESVTPTYIMEPREIYEVYGDRPYTIFP CGAWRVDRDTVLLTYGAGDYVVGIGSLNINELIDMLE
Sequences:
>Translated_357_residues MASGSNSFFPLAEGAAEAASARRPETRDIVRRLGVIPPERITITNYPVARPLAVFNAALSVEEDNARIYARIIMGYYLYI SAIAEINIPLEDINDGSVGWRNYAAAIVVYPSTRYDVWGTEDPRVFRLDEKLYMVYTGRTVNYFRQGAERERTLPVAAVM EENGWTKKAVFVLPPGLRRHLISDKNAFLVRVGGDLLLFHRPHMDDNRFYLAVSKVEELPHTCSSGICEIEVRDTVWVLP QAPFETKIGWATPPVDVAGDTVIALAHGVDREIGVYRVFAVKLRYSRKRGITVESVTPTYIMEPREIYEVYGDRPYTIFP CGAWRVDRDTVLLTYGAGDYVVGIGSLNINELIDMLE >Mature_356_residues ASGSNSFFPLAEGAAEAASARRPETRDIVRRLGVIPPERITITNYPVARPLAVFNAALSVEEDNARIYARIIMGYYLYIS AIAEINIPLEDINDGSVGWRNYAAAIVVYPSTRYDVWGTEDPRVFRLDEKLYMVYTGRTVNYFRQGAERERTLPVAAVME ENGWTKKAVFVLPPGLRRHLISDKNAFLVRVGGDLLLFHRPHMDDNRFYLAVSKVEELPHTCSSGICEIEVRDTVWVLPQ APFETKIGWATPPVDVAGDTVIALAHGVDREIGVYRVFAVKLRYSRKRGITVESVTPTYIMEPREIYEVYGDRPYTIFPC GAWRVDRDTVLLTYGAGDYVVGIGSLNINELIDMLE
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40218; Mature: 40087
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGSNSFFPLAEGAAEAASARRPETRDIVRRLGVIPPERITITNYPVARPLAVFNAALS CCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHEEEE VEEDNARIYARIIMGYYLYISAIAEINIPLEDINDGSVGWRNYAAAIVVYPSTRYDVWGT EECCCCEEEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEECCCCEECCCC EDPRVFRLDEKLYMVYTGRTVNYFRQGAERERTLPVAAVMEENGWTKKAVFVLPPGLRRH CCCEEEEECCEEEEEEECCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHH LISDKNAFLVRVGGDLLLFHRPHMDDNRFYLAVSKVEELPHTCSSGICEIEVRDTVWVLP HCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEHHHHCCHHHHCCEEEEEECCEEEEEC QAPFETKIGWATPPVDVAGDTVIALAHGVDREIGVYRVFAVKLRYSRKRGITVESVTPTY CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHCCCEEEEECCCEE IMEPREIYEVYGDRPYTIFPCGAWRVDRDTVLLTYGAGDYVVGIGSLNINELIDMLE EECHHHHHHHHCCCCEEEEECCCEEECCCEEEEEECCCCEEEEECCCCHHHHHHHCC >Mature Secondary Structure ASGSNSFFPLAEGAAEAASARRPETRDIVRRLGVIPPERITITNYPVARPLAVFNAALS CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHEEEE VEEDNARIYARIIMGYYLYISAIAEINIPLEDINDGSVGWRNYAAAIVVYPSTRYDVWGT EECCCCEEEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEECCCCEECCCC EDPRVFRLDEKLYMVYTGRTVNYFRQGAERERTLPVAAVMEENGWTKKAVFVLPPGLRRH CCCEEEEECCEEEEEEECCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHH LISDKNAFLVRVGGDLLLFHRPHMDDNRFYLAVSKVEELPHTCSSGICEIEVRDTVWVLP HCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEHHHHCCHHHHCCEEEEEECCEEEEEC QAPFETKIGWATPPVDVAGDTVIALAHGVDREIGVYRVFAVKLRYSRKRGITVESVTPTY CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHCCCEEEEECCCEE IMEPREIYEVYGDRPYTIFPCGAWRVDRDTVLLTYGAGDYVVGIGSLNINELIDMLE EECHHHHHHHHCCCCEEEEECCCEEECCCEEEEEECCCCEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA