Click here to switch to the map view.

The map label for this gene is 124028278

Identifier: 124028278

GI number: 124028278

Start: 1435609

End: 1435932

Strand: Reverse

Name: 124028278

Synonym: Hbut_1429

Alternate gene names: NA

Gene position: 1435932-1435609 (Counterclockwise)

Preceding gene: 124028279

Following gene: 124028276

Centisome position: 86.13

GC content: 59.26

Gene sequence:

>324_bases
TTGGTTGAGGAGGGCACTGTAAGGGAGCGAATCATAAAGATCTTGATGGAGGCTCGTCGCCCTCTCACGGCGCGCGAGAT
AGCCATGACTCTGGGTCTCGATCCCGCAAGCAGTGAGGCGGAGATATACGAGCACCTGCGCCACATAGTTAAGACGCTAC
GGCGCCGCCACGGTCGTAGGTCGGTTCTCTACATGATACCGCCGCAGTGCCGGGACTGCGGCTACGTGTTCGCAGAGCTC
ACGGAGCCCTACAAGCCCAGCAAGTGCCCCCGCTGCAAGAGCCAGCGCATTGACCCACCGAGATTCTACATAAAGGAGGA
GTAG

Upstream 100 bases:

>100_bases
GTTCGCGAGCTTCCTAGACGAGATCTACAGACTAGTTAAAAAGGGAGCACTCTCCACATTTTAAGCTGTAGAATCTGACG
CCGCTGGGAATGATTAGGCC

Downstream 100 bases:

>100_bases
CAAGGCTCGACGCTAAGCGGCGACCCGGCAGGCCTGTGGCGGCGGAGCCGGAGCCCACGCTTCGCTGCTAGGGCCTCCAG
CTCCTCCCGGGCCTCCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MVEEGTVRERIIKILMEARRPLTAREIAMTLGLDPASSEAEIYEHLRHIVKTLRRRHGRRSVLYMIPPQCRDCGYVFAEL
TEPYKPSKCPRCKSQRIDPPRFYIKEE

Sequences:

>Translated_107_residues
MVEEGTVRERIIKILMEARRPLTAREIAMTLGLDPASSEAEIYEHLRHIVKTLRRRHGRRSVLYMIPPQCRDCGYVFAEL
TEPYKPSKCPRCKSQRIDPPRFYIKEE
>Mature_107_residues
MVEEGTVRERIIKILMEARRPLTAREIAMTLGLDPASSEAEIYEHLRHIVKTLRRRHGRRSVLYMIPPQCRDCGYVFAEL
TEPYKPSKCPRCKSQRIDPPRFYIKEE

Specific function: Unknown

COG id: COG3357

COG function: function code K; Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12629; Mature: 12629

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEEGTVRERIIKILMEARRPLTAREIAMTLGLDPASSEAEIYEHLRHIVKTLRRRHGRR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SVLYMIPPQCRDCGYVFAELTEPYKPSKCPRCKSQRIDPPRFYIKEE
CEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MVEEGTVRERIIKILMEARRPLTAREIAMTLGLDPASSEAEIYEHLRHIVKTLRRRHGRR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SVLYMIPPQCRDCGYVFAELTEPYKPSKCPRCKSQRIDPPRFYIKEE
CEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA