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The map label for this gene is dppA [H]

Identifier: 124028234

GI number: 124028234

Start: 1379711

End: 1380562

Strand: Reverse

Name: dppA [H]

Synonym: Hbut_1384

Alternate gene names: 124028234

Gene position: 1380562-1379711 (Counterclockwise)

Preceding gene: 124028236

Following gene: 124028228

Centisome position: 82.81

GC content: 57.51

Gene sequence:

>852_bases
TTGAAGATCTACGTCTCCGTAGACCTTGAAGGCCTACCTGGCATATCAACGCTGTCCCAGGTCGCGCCCGGCTACCCTCT
CTACGGGGATGCACGCCGCATCATGACCTGGATCGTGAATGTTCTTGCGGACGAGTTTTCAGTGCTCGGTGTGGATGATG
TAGTTGTAGCTGATAGCCACGGGTTCATGGCGAACATAGATTACATTGATGTTGATGAGCGTGTCCGGCTAGTGCAAGGC
TACCCTAGACCATTCTCGATGGTTCTCGGCGTGGAGGAGGGCTTCGACGCTGCAATGTTCATAGGCTACCACGCCGCCGC
TGGCACCACAGGTGGATTCCTCGAGCACACCTACAGCTCCAGGGTTATCCACAGAATCTACGTCAACGGCGAGTTGGCTA
GCGAGTACCTGCTAAACGCGCTCTACGCTGGCGAGCACGGTGTTCCAGTAGTACTGGTTGCGGGGGATGAGCATCTCCGG
AGCCAGGTCGAGAAGCATACCCCGTGGGCTGTATTCCTGCCGCTCAAGAAGGGGTATGGAAGGCTTGCAGCCATGTATGA
GTCGAAGTCGCTGGTAGAGCAGAAGCTAAGGAAGGCGGTCAGAGAAGCCGTTGAGAGGCTGAAGCGCGGCAAAGCCCAGC
CACTAAAGCCAAACGGCGAGCTGGAGCTCCGAGTAGAGCTGCGCGACAGCCTCTACGCAGACATGGCACAGCTGCTGCCC
AGGGCGGAGAGGCTAGACGCCTATACCCTACGTTACCGCGCCTACTCGGCACGCGACGCACTAGCATTCGTAGAGCTCGT
CGCATGGATAGGCTACGCGGCATCAGCGATGATGGAGAAAATGAGGGGGTAA

Upstream 100 bases:

>100_bases
GGGAAGGGCCGGGCCTGCTAGGGGATGGCACTGTTACTGCAGGGTTGGATGTTTAACCGTCTACCCTGGATCAGGCTGTA
TCTTGGAGGGCTTCTGAGCC

Downstream 100 bases:

>100_bases
TCCATCGGAAATCACAACGAATGTCAAGGTCAACCCTTTTCACCCCATACTTCATCAGTAGGGTTGGGGAAGCCAGACGG
ATGGTACACTGTGTTATCGT

Product: D-aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKIYVSVDLEGLPGISTLSQVAPGYPLYGDARRIMTWIVNVLADEFSVLGVDDVVVADSHGFMANIDYIDVDERVRLVQG
YPRPFSMVLGVEEGFDAAMFIGYHAAAGTTGGFLEHTYSSRVIHRIYVNGELASEYLLNALYAGEHGVPVVLVAGDEHLR
SQVEKHTPWAVFLPLKKGYGRLAAMYESKSLVEQKLRKAVREAVERLKRGKAQPLKPNGELELRVELRDSLYADMAQLLP
RAERLDAYTLRYRAYSARDALAFVELVAWIGYAASAMMEKMRG

Sequences:

>Translated_283_residues
MKIYVSVDLEGLPGISTLSQVAPGYPLYGDARRIMTWIVNVLADEFSVLGVDDVVVADSHGFMANIDYIDVDERVRLVQG
YPRPFSMVLGVEEGFDAAMFIGYHAAAGTTGGFLEHTYSSRVIHRIYVNGELASEYLLNALYAGEHGVPVVLVAGDEHLR
SQVEKHTPWAVFLPLKKGYGRLAAMYESKSLVEQKLRKAVREAVERLKRGKAQPLKPNGELELRVELRDSLYADMAQLLP
RAERLDAYTLRYRAYSARDALAFVELVAWIGYAASAMMEKMRG
>Mature_283_residues
MKIYVSVDLEGLPGISTLSQVAPGYPLYGDARRIMTWIVNVLADEFSVLGVDDVVVADSHGFMANIDYIDVDERVRLVQG
YPRPFSMVLGVEEGFDAAMFIGYHAAAGTTGGFLEHTYSSRVIHRIYVNGELASEYLLNALYAGEHGVPVVLVAGDEHLR
SQVEKHTPWAVFLPLKKGYGRLAAMYESKSLVEQKLRKAVREAVERLKRGKAQPLKPNGELELRVELRDSLYADMAQLLP
RAERLDAYTLRYRAYSARDALAFVELVAWIGYAASAMMEKMRG

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 31564; Mature: 31564

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYVSVDLEGLPGISTLSQVAPGYPLYGDARRIMTWIVNVLADEFSVLGVDDVVVADSH
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCC
GFMANIDYIDVDERVRLVQGYPRPFSMVLGVEEGFDAAMFIGYHAAAGTTGGFLEHTYSS
CCEEECCEECHHHHHHHHHCCCCCCEEEEECCCCCCEEHEEEEHHCCCCCCCHHHHHHHH
RVIHRIYVNGELASEYLLNALYAGEHGVPVVLVAGDEHLRSQVEKHTPWAVFLPLKKGYG
HEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCH
RLAAMYESKSLVEQKLRKAVREAVERLKRGKAQPLKPNGELELRVELRDSLYADMAQLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
RAERLDAYTLRYRAYSARDALAFVELVAWIGYAASAMMEKMRG
HHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIYVSVDLEGLPGISTLSQVAPGYPLYGDARRIMTWIVNVLADEFSVLGVDDVVVADSH
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCC
GFMANIDYIDVDERVRLVQGYPRPFSMVLGVEEGFDAAMFIGYHAAAGTTGGFLEHTYSS
CCEEECCEECHHHHHHHHHCCCCCCEEEEECCCCCCEEHEEEEHHCCCCCCCHHHHHHHH
RVIHRIYVNGELASEYLLNALYAGEHGVPVVLVAGDEHLRSQVEKHTPWAVFLPLKKGYG
HEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCH
RLAAMYESKSLVEQKLRKAVREAVERLKRGKAQPLKPNGELELRVELRDSLYADMAQLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
RAERLDAYTLRYRAYSARDALAFVELVAWIGYAASAMMEKMRG
HHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]