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The map label for this gene is rpl15p

Identifier: 124028177

GI number: 124028177

Start: 1319705

End: 1320160

Strand: Direct

Name: rpl15p

Synonym: Hbut_1322

Alternate gene names: 124028177

Gene position: 1319705-1320160 (Clockwise)

Preceding gene: 124028176

Following gene: 124028178

Centisome position: 79.16

GC content: 54.39

Gene sequence:

>456_bases
ATGGTTGTGCGTAGGAGGAAAAAGAGTCGCCACCTAAGAGGCAGAACCAGGACGATGGGCTGGGGTCGTATAGGTCAGCA
TAGGGGTAGCGGTAGCAGGGGAGGCTTTGGCGCTGCCGGCATGCACAAGCACATGTGGACCTGGGTAGTAAAGTACGCTC
CAACATGGTTCGGCAAGCATGGCTTCAACAGGCCACAGATATACGAGCTCAAGGCGTCAGAGATAAACGTTGGAGAGCTG
GCTGAGAAGCTTGATGCATGGCTAAGGGAAGGTGTTGCCAAGCAGGAGGAGGGTAAGATAGTGGTGAACCTTGCAGAGCT
AGGCTACGCGAAGCTGCTAGGACGCGGCAAGATAACAAGGCCAGTAAAGGTCATAGTACCCGCAGCGACGGAACGTGCTG
TCAAGAAGATAGAGGAGGCTGGCGGCGAAGTAGTAATACTCAAGCAGCAAGGGTAA

Upstream 100 bases:

>100_bases
TATGGCGCAGGCGGCGAGCTAGGCTACCGCGGGCCAGCGATAAACGAGCTTATAAGACGCATGCTCTAACAAGGCTAGGC
ACTGTGGGGGTGCCTGATTC

Downstream 100 bases:

>100_bases
CGCTGTTTCTCGAGTCCTGCAGCTCCTCCTTTCTGCTCTACACGTGTGTTCGCACATCTTGAACCAGCTTTGCCCTATGC
CGGGGGCCTCTTCTGGTTCT

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVVRRRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKHGFNRPQIYELKASEINVGEL
AEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKITRPVKVIVPAATERAVKKIEEAGGEVVILKQQG

Sequences:

>Translated_151_residues
MVVRRRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKHGFNRPQIYELKASEINVGEL
AEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKITRPVKVIVPAATERAVKKIEEAGGEVVILKQQG
>Mature_151_residues
MVVRRRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKHGFNRPQIYELKASEINVGEL
AEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKITRPVKVIVPAATERAVKKIEEAGGEVVILKQQG

Specific function: Binds to the 23S rRNA

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family

Homologues:

Organism=Homo sapiens, GI4506625, Length=151, Percent_Identity=35.0993377483444, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI17136880, Length=152, Percent_Identity=38.8157894736842, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15_HYPBU (A2BME1)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013497.1
- ProteinModelPortal:   A2BME1
- SMR:   A2BME1
- STRING:   A2BME1
- GeneID:   4782009
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1322
- eggNOG:   arNOG11273
- HOGENOM:   HBG727142
- OMA:   GSRTCGG
- ProtClustDB:   PRK06419
- BioCyc:   HBUT415426:HBUT_1322-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01341_A
- InterPro:   IPR001196
- InterPro:   IPR021131

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 16894; Mature: 16894

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRRRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKH
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC
GFNRPQIYELKASEINVGELAEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKITR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCC
PVKVIVPAATERAVKKIEEAGGEVVILKQQG
CEEEEEECHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MVVRRRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKH
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC
GFNRPQIYELKASEINVGELAEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKITR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCC
PVKVIVPAATERAVKKIEEAGGEVVILKQQG
CEEEEEECHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA