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The map label for this gene is rpl19e [H]

Identifier: 124028173

GI number: 124028173

Start: 1317191

End: 1317652

Strand: Direct

Name: rpl19e [H]

Synonym: Hbut_1318

Alternate gene names: 124028173

Gene position: 1317191-1317652 (Clockwise)

Preceding gene: 124028172

Following gene: 124028174

Centisome position: 79.01

GC content: 56.06

Gene sequence:

>462_bases
GTGACCGACCTCTCCATGCAGAAGAGGCTAGCCGCTGAGGTGCTCGGTGTAGGGGTGTCAAGGATCTGGATTGATCCATC
AAGGATAGAGGATGTAGCTAGCGCTATTACTAGGGAGGAGATAAAGAGGCTAATAAAGGAGGGTGTCATACAGGTAAAGC
CGACCCATAGCCCCTCCAGGGGCAGGTGGAGGGAGCGCCACGAGGCACGCAAGAAGGGTAGGCACCGCGGTCCAGGCAGG
CGTAAGGGTGATGCTACTGCTCGTAGGGATCCGAAGGAGGAGTGGATGCACAGGATAAGGAAGATACGCCGCTACCTACG
CTACCTACGCGACCATGGCGTGATAGACAGGAAGACTTACAGGAAGCTGTACATGTGGGCTAAGGGCGGTATGTTCCCAA
CATTCTCGGCACTGCAGCGTTGGCTCGAGGAGCATGGCTACCCTACAAGCGTGAAGAAGTAG

Upstream 100 bases:

>100_bases
CCTCGGGTGTTGGGCTACGCAAGCGGCTCGAGATTATAGAGAAGGCAAAAGCCTAAGGGGTTTAGGGTGGCAAACGCATA
GGTACGTGGGGTGAAGTAGT

Downstream 100 bases:

>100_bases
GTGTTGCTGAGCCACACGTCTCGCCCAGTATTTGGCTCCCTGTCTCCTCTCCTGGCTCGCCGAGGTCCCTCCCCTACTCA
GCTTATTAGGGGTGGGGGCC

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTDLSMQKRLAAEVLGVGVSRIWIDPSRIEDVASAITREEIKRLIKEGVIQVKPTHSPSRGRWRERHEARKKGRHRGPGR
RKGDATARRDPKEEWMHRIRKIRRYLRYLRDHGVIDRKTYRKLYMWAKGGMFPTFSALQRWLEEHGYPTSVKK

Sequences:

>Translated_153_residues
MTDLSMQKRLAAEVLGVGVSRIWIDPSRIEDVASAITREEIKRLIKEGVIQVKPTHSPSRGRWRERHEARKKGRHRGPGR
RKGDATARRDPKEEWMHRIRKIRRYLRYLRDHGVIDRKTYRKLYMWAKGGMFPTFSALQRWLEEHGYPTSVKK
>Mature_152_residues
TDLSMQKRLAAEVLGVGVSRIWIDPSRIEDVASAITREEIKRLIKEGVIQVKPTHSPSRGRWRERHEARKKGRHRGPGRR
KGDATARRDPKEEWMHRIRKIRRYLRYLRDHGVIDRKTYRKLYMWAKGGMFPTFSALQRWLEEHGYPTSVKK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=145, Percent_Identity=44.8275862068966, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17508673, Length=127, Percent_Identity=44.0944881889764, Blast_Score=109, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6319559, Length=138, Percent_Identity=40.5797101449275, Blast_Score=92, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6319444, Length=138, Percent_Identity=40.5797101449275, Blast_Score=92, Evalue=3e-20,
Organism=Drosophila melanogaster, GI45552831, Length=142, Percent_Identity=45.7746478873239, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17136322, Length=142, Percent_Identity=45.7746478873239, Blast_Score=125, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 18199; Mature: 18068

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSMQKRLAAEVLGVGVSRIWIDPSRIEDVASAITREEIKRLIKEGVIQVKPTHSPSR
CCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GRWRERHEARKKGRHRGPGRRKGDATARRDPKEEWMHRIRKIRRYLRYLRDHGVIDRKTY
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RKLYMWAKGGMFPTFSALQRWLEEHGYPTSVKK
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDLSMQKRLAAEVLGVGVSRIWIDPSRIEDVASAITREEIKRLIKEGVIQVKPTHSPSR
CCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GRWRERHEARKKGRHRGPGRRKGDATARRDPKEEWMHRIRKIRRYLRYLRDHGVIDRKTY
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RKLYMWAKGGMFPTFSALQRWLEEHGYPTSVKK
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]