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The map label for this gene is rpl24p

Identifier: 124028166

GI number: 124028166

Start: 1313606

End: 1314055

Strand: Direct

Name: rpl24p

Synonym: Hbut_1311

Alternate gene names: 124028166

Gene position: 1313606-1314055 (Clockwise)

Preceding gene: 124028165

Following gene: 124028167

Centisome position: 78.79

GC content: 56.22

Gene sequence:

>450_bases
ATGCGGTGGGTTAAGTCTTCGCAGCCCAGGAAGCAGCGTCGCGCGCTCTTCAACGCTCCCCTCCACAAGCGGCAGAAGCT
TATGGCTGCACCGCTAAGCCCCGAGCTGAGGAAGCAGTATGGCATTCGTAGCCTTCCAGTAAGGGTTGGTGACGAAGTTG
TAATAATGCGTGGCGACTTCAAGGGGCACCGTGGCAAGGTTGTACGTGTAGACCTGCGCCGCATGCGGATATTCGTTGAG
GGCGTAACGATCACCAATGCTAGGGGTGAGCCTCGCTACTACCCGATACACCCCTCCAACGTTATGATAGTCTCACTAAA
CCTTGACGATGAGAGGAGGAGGCAGATAATAGAGAGGAAGAGGAGGCAGCGTGAGCTACAGCTAGCACTAATGAAGGCAG
CGGCGGGGGGCTCAGCTGAAGCTATAGGGGAGGAGGGGAAGGCTAGCTAA

Upstream 100 bases:

>100_bases
TACGTGGCCCCGTGGCTAGAGAGGCTGCTGAGCGCTGGCCAAAGGTTGCCAACATAGCCAGCATAATAATCTAAGGCGCC
TAGCCTGGGGTGTTGTGTAT

Downstream 100 bases:

>100_bases
GCACCGGGTTTGAGGTGGTAAGGTTATGGCGCGAATGGGTGGTAGGAGGCACCTAAAGACGCTGGCTGCGCCAAAGTTCT
GGCCTGTAAGGCAGCGTGCT

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRWVKSSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDFKGHRGKVVRVDLRRMRIFVE
GVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERKRRQRELQLALMKAAAGGSAEAIGEEGKAS

Sequences:

>Translated_149_residues
MRWVKSSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDFKGHRGKVVRVDLRRMRIFVE
GVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERKRRQRELQLALMKAAAGGSAEAIGEEGKAS
>Mature_149_residues
MRWVKSSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDFKGHRGKVVRVDLRRMRIFVE
GVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERKRRQRELQLALMKAAAGGSAEAIGEEGKAS

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI7705813, Length=122, Percent_Identity=44.2622950819672, Blast_Score=101, Evalue=3e-22,
Organism=Homo sapiens, GI4506621, Length=122, Percent_Identity=44.2622950819672, Blast_Score=100, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17535693, Length=128, Percent_Identity=42.96875, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17535691, Length=99, Percent_Identity=45.4545454545455, Blast_Score=93, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI32564329, Length=100, Percent_Identity=45, Blast_Score=92, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6323376, Length=115, Percent_Identity=43.4782608695652, Blast_Score=92, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321471, Length=115, Percent_Identity=43.4782608695652, Blast_Score=91, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21357853, Length=116, Percent_Identity=48.2758620689655, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_HYPBU (A2BMD0)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013486.1
- ProteinModelPortal:   A2BMD0
- SMR:   A2BMD0
- STRING:   A2BMD0
- GeneID:   4781544
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1311
- eggNOG:   arNOG11456
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- PhylomeDB:   A2BMD0
- ProtClustDB:   PRK01191
- BioCyc:   HBUT415426:HBUT_1311-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 17150; Mature: 17150

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWVKSSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDF
CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEECCCEEEEEECCC
KGHRGKVVRVDLRRMRIFVEGVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERK
CCCCCCEEEEEHHHEEEEEECEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHH
RRQRELQLALMKAAAGGSAEAIGEEGKAS
HHHHHHHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRWVKSSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDF
CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEECCCEEEEEECCC
KGHRGKVVRVDLRRMRIFVEGVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERK
CCCCCCEEEEEHHHEEEEEECEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHH
RRQRELQLALMKAAAGGSAEAIGEEGKAS
HHHHHHHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA