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The map label for this gene is 124027962

Identifier: 124027962

GI number: 124027962

Start: 1106747

End: 1107484

Strand: Reverse

Name: 124027962

Synonym: Hbut_1094

Alternate gene names: NA

Gene position: 1107484-1106747 (Counterclockwise)

Preceding gene: 124027963

Following gene: 124027961

Centisome position: 66.43

GC content: 55.15

Gene sequence:

>738_bases
TTGCGCATAGCAGTACTCAGCTTTGACGTGGAGCAGGACTGTCCGCCATACCTCGGCGAGAGCTACCGCGGGGTAGAGGA
AGGGCTCCCATACATCCTTGACATACTATCCCAGGAGAGGGTTAGGGCAACTTTCTTCTCAACAGCGCGCGTAGCTGAGA
GGTACCCCCAGCTAATACGCAGGATAGTAGATGAGGGCCATGAGCTGGGTTGCCATAGCTATGCCCACGAACGCCTAGAT
AAGCTACCCGGAAGTACTGTGGCAAGCCTACTTGAGAAGGCCACAGCTAAGCTCAGAAGGTTCACGGACCAGCTTACAAG
CTTTCGAGCCCCCAACCTTAAGCTCCCACAGAGCCTCTTACCGGTCCTCCACAAACTCGGCTACCAGGTGGACTCGTCGA
TAGCCCTCTACAAGCCTCCGTTCCGCGCCATGCCAAGGGTAGAGTATGGCATCGTAAGGCTACCAGTGACTGTTACATCC
TCTATGCTGCGGCTGCCGTGGCGCATCCAAAAGAGGATACACGACGTGCTGCCAAGAGGACTAAGGATATACTTTGCCCA
TCCCTGGGAGTACATAGATATGAGCTGGGCGAGGGTAAGAGTAGACTGTCGCTACAACACTGGGGAGGCTGCACTAGAGC
TGCTAAGGAAGCTCATAGGATACCTCCGCGGGAAAGGCTACACGCTGGTAACAATATCCGAAGCGGCACAACATGTGGAG
GCAAGTCGGCAGGACTGA

Upstream 100 bases:

>100_bases
AGGGCTACCATGGACGCGGCTATGGACAGCGATAAACGCTACCTCCTATACCGTGCCTGGCTCCGGGTATCAAGGATTCT
TGGAAGGTGAGCAGTCCGGT

Downstream 100 bases:

>100_bases
GAAAGCTCCATTCTCAAGGGGTTGTTCTGTCATTCCTGTTCTAGGGTTTCTTAACAGAAATGGTAGGTAGTTTGAGGTGG
AGAGCTGACATGGTGATGTT

Product: xylanase/chitin deacetylase

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; PEP-CTERM Locus Polysaccharide Deactylase; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRIAVLSFDVEQDCPPYLGESYRGVEEGLPYILDILSQERVRATFFSTARVAERYPQLIRRIVDEGHELGCHSYAHERLD
KLPGSTVASLLEKATAKLRRFTDQLTSFRAPNLKLPQSLLPVLHKLGYQVDSSIALYKPPFRAMPRVEYGIVRLPVTVTS
SMLRLPWRIQKRIHDVLPRGLRIYFAHPWEYIDMSWARVRVDCRYNTGEAALELLRKLIGYLRGKGYTLVTISEAAQHVE
ASRQD

Sequences:

>Translated_245_residues
MRIAVLSFDVEQDCPPYLGESYRGVEEGLPYILDILSQERVRATFFSTARVAERYPQLIRRIVDEGHELGCHSYAHERLD
KLPGSTVASLLEKATAKLRRFTDQLTSFRAPNLKLPQSLLPVLHKLGYQVDSSIALYKPPFRAMPRVEYGIVRLPVTVTS
SMLRLPWRIQKRIHDVLPRGLRIYFAHPWEYIDMSWARVRVDCRYNTGEAALELLRKLIGYLRGKGYTLVTISEAAQHVE
ASRQD
>Mature_245_residues
MRIAVLSFDVEQDCPPYLGESYRGVEEGLPYILDILSQERVRATFFSTARVAERYPQLIRRIVDEGHELGCHSYAHERLD
KLPGSTVASLLEKATAKLRRFTDQLTSFRAPNLKLPQSLLPVLHKLGYQVDSSIALYKPPFRAMPRVEYGIVRLPVTVTS
SMLRLPWRIQKRIHDVLPRGLRIYFAHPWEYIDMSWARVRVDCRYNTGEAALELLRKLIGYLRGKGYTLVTISEAAQHVE
ASRQD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28197; Mature: 28197

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVLSFDVEQDCPPYLGESYRGVEEGLPYILDILSQERVRATFFSTARVAERYPQLIR
CEEEEEEECCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVDEGHELGCHSYAHERLDKLPGSTVASLLEKATAKLRRFTDQLTSFRAPNLKLPQSLL
HHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
PVLHKLGYQVDSSIALYKPPFRAMPRVEYGIVRLPVTVTSSMLRLPWRIQKRIHDVLPRG
HHHHHHCCCCCCCEEEECCCHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHCCCC
LRIYFAHPWEYIDMSWARVRVDCRYNTGEAALELLRKLIGYLRGKGYTLVTISEAAQHVE
EEEEEECCHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH
ASRQD
HCCCC
>Mature Secondary Structure
MRIAVLSFDVEQDCPPYLGESYRGVEEGLPYILDILSQERVRATFFSTARVAERYPQLIR
CEEEEEEECCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVDEGHELGCHSYAHERLDKLPGSTVASLLEKATAKLRRFTDQLTSFRAPNLKLPQSLL
HHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
PVLHKLGYQVDSSIALYKPPFRAMPRVEYGIVRLPVTVTSSMLRLPWRIQKRIHDVLPRG
HHHHHHCCCCCCCEEEECCCHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHCCCC
LRIYFAHPWEYIDMSWARVRVDCRYNTGEAALELLRKLIGYLRGKGYTLVTISEAAQHVE
EEEEEECCHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH
ASRQD
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA