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The map label for this gene is rpiA [H]

Identifier: 124027959

GI number: 124027959

Start: 1103511

End: 1104275

Strand: Reverse

Name: rpiA [H]

Synonym: Hbut_1091

Alternate gene names: 124027959

Gene position: 1104275-1103511 (Counterclockwise)

Preceding gene: 124027960

Following gene: 124027958

Centisome position: 66.24

GC content: 55.16

Gene sequence:

>765_bases
TTGACTGCACTTGCAAAGGTGGAGGCAGCTAGACGTGCAGCCGAGATTCTGGAACCCCTCATAGAGAGAGCTGAAAGGAT
AGGAATTGGTACGGGCTCCACAGTGAGGCTCGTTCTTAGATTCCTTATCGAGTCGCCAGCTGCATCCGCGTTGCGCCGCG
CCAAGGTATACGCTTCGAGCTTCGACACGCTGCTCGAGCTACGCAGACTTGGCATTGAGGCCTATGATTTCCTGCCTCGG
GACGGTCTAGACGTATACTTTGACGGGGCTGACGAAGTTGCAAGGGTCTCGGATATGTGTATGGCCGTTAAAGGCCGCGG
GGCGGCCATGTTGCGGGAGAAGCTACTAGCTTTCAACAGCGCCTATACACTGCTAGTGGTCGACGAGTCTAAGGTCTCGA
GAAACCTTGGTGACAAGGGGAAGCCGGTACCCGTTGAGGTTGTACCGCCAGCGGTTGAAACCATAGTAGAGGAGTTCGAA
TCAAGGGGTATACGTGCGGAAGTGAGGACAAACTGTAGCTGTAGGGATGGCCCAGCCTTTACTGACAACTATGGCATCGT
CATAGACACGTGGCCCTGGGGCGTTATGAGCCCCATACAGTATGAGTCGCTGCTTGACACTCTTCCCGGCGTAATGGGCC
ACGGTCTATTCATAGGCTACATGGACGCTATAGTGGTGGGCTACGGTGACGGTAGAAGCGAGGAGTGGAGGTGTAGACGC
ACAAGGCTATCTGCTGGCGCGAAGGCTAGGAGAGCTGAGAGATAG

Upstream 100 bases:

>100_bases
TACATGCCAGTAATACTGCCAGAGGGCTCGGCTAGGCCGGGTGAGTGGAGGTGCATTGAAGTAGTAGACGCAACCTGGTA
CGACCTACGGGGACGCGTGG

Downstream 100 bases:

>100_bases
GCTCCGCAGGGCAATCGAGAGTCCCTCGCCCGAGGCGCGGGCAGCACAGGGCGAGCTACGTGTAGTAAGGCTTGCAAGGA
TGCCTGTTGAGCTGTGGGTT

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTALAKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYASSFDTLLELRRLGIEAYDFLPR
DGLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFNSAYTLLVVDESKVSRNLGDKGKPVPVEVVPPAVETIVEEFE
SRGIRAEVRTNCSCRDGPAFTDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSEEWRCRR
TRLSAGAKARRAER

Sequences:

>Translated_254_residues
MTALAKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYASSFDTLLELRRLGIEAYDFLPR
DGLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFNSAYTLLVVDESKVSRNLGDKGKPVPVEVVPPAVETIVEEFE
SRGIRAEVRTNCSCRDGPAFTDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSEEWRCRR
TRLSAGAKARRAER
>Mature_253_residues
TALAKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYASSFDTLLELRRLGIEAYDFLPRD
GLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFNSAYTLLVVDESKVSRNLGDKGKPVPVEVVPPAVETIVEEFES
RGIRAEVRTNCSCRDGPAFTDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSEEWRCRRT
RLSAGAKARRAER

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=238, Percent_Identity=27.7310924369748, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1789280, Length=206, Percent_Identity=31.5533980582524, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17551758, Length=241, Percent_Identity=29.4605809128631, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324669, Length=250, Percent_Identity=30.8, Blast_Score=76, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281364072, Length=218, Percent_Identity=28.4403669724771, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 27992; Mature: 27860

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALAKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYASS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FDTLLELRRLGIEAYDFLPRDGLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFNS
HHHHHHHHHCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
AYTLLVVDESKVSRNLGDKGKPVPVEVVPPAVETIVEEFESRGIRAEVRTNCSCRDGPAF
CEEEEEEECHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE
TDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSEEWRCRR
ECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
TRLSAGAKARRAER
HHHHCCHHHHCCCC
>Mature Secondary Structure 
TALAKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYASS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FDTLLELRRLGIEAYDFLPRDGLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFNS
HHHHHHHHHCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
AYTLLVVDESKVSRNLGDKGKPVPVEVVPPAVETIVEEFESRGIRAEVRTNCSCRDGPAF
CEEEEEEECHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCE
TDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSEEWRCRR
ECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
TRLSAGAKARRAER
HHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA