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The map label for this gene is trkA [H]

Identifier: 124027785

GI number: 124027785

Start: 918840

End: 919496

Strand: Direct

Name: trkA [H]

Synonym: Hbut_0912

Alternate gene names: 124027785

Gene position: 918840-919496 (Clockwise)

Preceding gene: 124027779

Following gene: 124027786

Centisome position: 55.11

GC content: 44.9

Gene sequence:

>657_bases
ATGCGCATACTAATTGTTGGCGCAGGTAAACTAGGCTCACTCCTAGCCAAAAAGCTCTCGGAAAAAGGCCACGACGTAAT
AGTCATAGATGTTGATAAGCAGAGAGCAGAACAAGTAGCGGCTGAAGCTGATGTGGCGGCATACGCTAGAGATGCGACGG
ATCCTTCAGTCTATGACGAGATAAACCTAGCAAATATAGATGTAGTCGTGGCAACGACAAATAGGGATGAGGTAAACCTC
TTCGTAGCACTAATGGCGCGTGAGTATGGCGTGTCAAGGGTGATAGTAAAAGTTAGAGATGCTAGGATAGGCCAGATAAT
AACGAGAATGGGTATAGCAGAACATGTAGTGGTAGAACCCCAGGTAATAAGCTCCATAGTTGAGGGTTTCATAGAGGGTA
AGTACAATATTGTAGAGTTAGCTCCAGTCTTTGTTGGTGGATTTAGACTAGTAACAATAACAATACCCGAGGGGAGTAGC
GTGGAGGGACAAATGATTGACGATATTAAGTACCCAAGGCATGGAGTTAAAATCCTCGCAGTATTCGACGGGGAAAACTT
TCACGACCCGAGTGTGGTAAGACTTGAAGCTGGCTACCAGATAATAGCCCTAGTAAGAGACGACGTCATAGAGGAATTCC
TAGAAGCATTTAGGTAG

Upstream 100 bases:

>100_bases
CCTAGCCCTAACGCGAGATATTATATAGCTATCATCGTAGCCAACGGGCAAGCTCATAATAGAGTCCACCCCCTCAGCCC
AACCGAGGGAAGAGTATCCA

Downstream 100 bases:

>100_bases
CGGCATGGGAGGGGTGTAGGCGTAGTGGTGGAGATAACTGATGCAGTGGCACAGCTAAATACAACGAAGATACTCATCTA
CGTTAAGAATACGCTGCTAG

Product: K+ transport system protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRILIVGAGKLGSLLAKKLSEKGHDVIVIDVDKQRAEQVAAEADVAAYARDATDPSVYDEINLANIDVVVATTNRDEVNL
FVALMAREYGVSRVIVKVRDARIGQIITRMGIAEHVVVEPQVISSIVEGFIEGKYNIVELAPVFVGGFRLVTITIPEGSS
VEGQMIDDIKYPRHGVKILAVFDGENFHDPSVVRLEAGYQIIALVRDDVIEEFLEAFR

Sequences:

>Translated_218_residues
MRILIVGAGKLGSLLAKKLSEKGHDVIVIDVDKQRAEQVAAEADVAAYARDATDPSVYDEINLANIDVVVATTNRDEVNL
FVALMAREYGVSRVIVKVRDARIGQIITRMGIAEHVVVEPQVISSIVEGFIEGKYNIVELAPVFVGGFRLVTITIPEGSS
VEGQMIDDIKYPRHGVKILAVFDGENFHDPSVVRLEAGYQIIALVRDDVIEEFLEAFR
>Mature_218_residues
MRILIVGAGKLGSLLAKKLSEKGHDVIVIDVDKQRAEQVAAEADVAAYARDATDPSVYDEINLANIDVVVATTNRDEVNL
FVALMAREYGVSRVIVKVRDARIGQIITRMGIAEHVVVEPQVISSIVEGFIEGKYNIVELAPVFVGGFRLVTITIPEGSS
VEGQMIDDIKYPRHGVKILAVFDGENFHDPSVVRLEAGYQIIALVRDDVIEEFLEAFR

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=213, Percent_Identity=29.1079812206573, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23945; Mature: 23945

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIVGAGKLGSLLAKKLSEKGHDVIVIDVDKQRAEQVAAEADVAAYARDATDPSVYDE
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHCC
INLANIDVVVATTNRDEVNLFVALMAREYGVSRVIVKVRDARIGQIITRMGIAEHVVVEP
CCEEEEEEEEEECCCCCHHHHEEEHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHEEECH
QVISSIVEGFIEGKYNIVELAPVFVGGFRLVTITIPEGSSVEGQMIDDIKYPRHGVKILA
HHHHHHHHHHHCCCCEEEEEEHEEECCEEEEEEECCCCCCCCCCCHHCCCCCCCCEEEEE
VFDGENFHDPSVVRLEAGYQIIALVRDDVIEEFLEAFR
EECCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRILIVGAGKLGSLLAKKLSEKGHDVIVIDVDKQRAEQVAAEADVAAYARDATDPSVYDE
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHCC
INLANIDVVVATTNRDEVNLFVALMAREYGVSRVIVKVRDARIGQIITRMGIAEHVVVEP
CCEEEEEEEEEECCCCCHHHHEEEHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHEEECH
QVISSIVEGFIEGKYNIVELAPVFVGGFRLVTITIPEGSSVEGQMIDDIKYPRHGVKILA
HHHHHHHHHHHCCCCEEEEEEHEEECCEEEEEEECCCCCCCCCCCHHCCCCCCCCEEEEE
VFDGENFHDPSVVRLEAGYQIIALVRDDVIEEFLEAFR
EECCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]