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The map label for this gene is ybjZ [C]

Identifier: 124027776

GI number: 124027776

Start: 908259

End: 909485

Strand: Direct

Name: ybjZ [C]

Synonym: Hbut_0902

Alternate gene names: 124027776

Gene position: 908259-909485 (Clockwise)

Preceding gene: 124027775

Following gene: 124027779

Centisome position: 54.48

GC content: 47.11

Gene sequence:

>1227_bases
ATGCTAATCCTACAGTTTATCGTTGATGCTATGAGGCTTGCACTGCGCTCGCTAAGCGAGAAGAGACTGCGTGCAGTTCT
AACAATAGTGGGTATATCGATTGGGCCTCTTGCACTAGTGGCGATGACGAGTGTTGTTAAGGGATATTCAAGCTACGTTC
TTGCACAGCTCCAGAGCCTAGGCCAGAACCTCATAATCGTTACTCCAAGCCAGGGCTACAAACTAACCGAGGATGACCTA
CGATTCATAGAGAGCCTGCCAGGAGTTAAGCATGCATCTCCATTTTACCTCTTAACCGGATTTGTACGTGTTGGCAGTGA
GGAGAAGAAGGTAACAATCTATGCTACCTCGATAGATCTCATGTTCGAAGCTGTTAATGGTCTCGAAATAATCGAAGGAT
CTAAGCCCTCTGAGAGTGATCTAATAAGGGCTGTTATCGGTTACAATGTGGCTTTCGATGAGAACGATAGGCAGGTCTAC
CATGCGGGAGACCCGATTACTATATCATACTATAGGGCTGAGCGTGCGAGGAAGATAGAACGTAGGCAGGTCACGGTTAT
AGTGTCTGGCATCGTAAACCGTTTTGGTGGTGCGCTATTCCTAAGTCCTGACGACAGCATATTGCTGAATACTGAGGCTG
GCCGCAAGCTATTCGGGTTCTCGGAGTGGAGTGGCATTCTCGTGCTCGCCGAAAATAGTAGGTACGTGCCACAGATAACT
GAGGCTATTAGAGCAGCTTATCGTGGCTCTGTAGAAGTAATGTCTTTCCAAGGGATTGCGAACGTTATTAACTCGATTGC
GAGTGCTATGGAGTTTATAGCATTTGCTACGAGTCTAGCAGCTTTCGCAGTCGCGGTAGCTGGTGTTGCTGCTACAATGA
TAACTTCCGTCATAGAGCGTGTTAGAGAGATAGGTGTGATGAAGGCGCTTGGTTTTACGGATACGCAAGTACTTACAATA
ATACTTCTCGAAGGAGTAATAATGAGTCTCATCGGTGCAGCTATAGGTATAGGTCTCGGCATAGCTGGCGCCTACGTACT
CTCCTCAACAGGATTCACTGTGCGTGGAGTAACTATGCAGTTTACAATAAAGGCCGAGCCAGCCATAACAGTTGATCTTA
TAGTATCGACGTTGCTAATAACCGTGTCTGTAGGGCTTATAGGCGGATTATTTCCGGCTTATCGAGCAGCAAGAATACCG
CCAGCTGTGGCACTTCGCTACGAGTAA

Upstream 100 bases:

>100_bases
GGTAGTTGCAGCATTTCTTGCAGTTGCAACGTTCATCATATACCGGTTCCTAAAGAGGCATGAGGCTAAGCTTCAAGGGG
CTTAGTGGGAGGATGCTAAG

Downstream 100 bases:

>100_bases
AATGATTGTGTTGTTTGTGTTTTAGCGTACCACGGCGTAGCAGCCAATTGTCTTCTCGTAGATAATGCCGTCCCTCCTGA
AGCTACTAATAGCCTCCTCT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MLILQFIVDAMRLALRSLSEKRLRAVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSLGQNLIIVTPSQGYKLTEDDL
RFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDLMFEAVNGLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVY
HAGDPITISYYRAERARKIERRQVTVIVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGFSEWSGILVLAENSRYVPQIT
EAIRAAYRGSVEVMSFQGIANVINSIASAMEFIAFATSLAAFAVAVAGVAATMITSVIERVREIGVMKALGFTDTQVLTI
ILLEGVIMSLIGAAIGIGLGIAGAYVLSSTGFTVRGVTMQFTIKAEPAITVDLIVSTLLITVSVGLIGGLFPAYRAARIP
PAVALRYE

Sequences:

>Translated_408_residues
MLILQFIVDAMRLALRSLSEKRLRAVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSLGQNLIIVTPSQGYKLTEDDL
RFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDLMFEAVNGLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVY
HAGDPITISYYRAERARKIERRQVTVIVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGFSEWSGILVLAENSRYVPQIT
EAIRAAYRGSVEVMSFQGIANVINSIASAMEFIAFATSLAAFAVAVAGVAATMITSVIERVREIGVMKALGFTDTQVLTI
ILLEGVIMSLIGAAIGIGLGIAGAYVLSSTGFTVRGVTMQFTIKAEPAITVDLIVSTLLITVSVGLIGGLFPAYRAARIP
PAVALRYE
>Mature_408_residues
MLILQFIVDAMRLALRSLSEKRLRAVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSLGQNLIIVTPSQGYKLTEDDL
RFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDLMFEAVNGLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVY
HAGDPITISYYRAERARKIERRQVTVIVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGFSEWSGILVLAENSRYVPQIT
EAIRAAYRGSVEVMSFQGIANVINSIASAMEFIAFATSLAAFAVAVAGVAATMITSVIERVREIGVMKALGFTDTQVLTI
ILLEGVIMSLIGAAIGIGLGIAGAYVLSSTGFTVRGVTMQFTIKAEPAITVDLIVSTLLITVSVGLIGGLFPAYRAARIP
PAVALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=421, Percent_Identity=26.3657957244656, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43886; Mature: 43886

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILQFIVDAMRLALRSLSEKRLRAVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQNLIIVTPSQGYKLTEDDLRFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDL
CCCEEEEECCCCCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHHH
MFEAVNGLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVYHAGDPITISYYRAERARKIE
HHHHHCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHH
RRQVTVIVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGFSEWSGILVLAENSRYVPQIT
HHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCEEECCCCCCCEEEEECCCCCCHHHH
EAIRAAYRGSVEVMSFQGIANVINSIASAMEFIAFATSLAAFAVAVAGVAATMITSVIER
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREIGVMKALGFTDTQVLTIILLEGVIMSLIGAAIGIGLGIAGAYVLSSTGFTVRGVTMQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
FTIKAEPAITVDLIVSTLLITVSVGLIGGLFPAYRAARIPPAVALRYE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MLILQFIVDAMRLALRSLSEKRLRAVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQNLIIVTPSQGYKLTEDDLRFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDL
CCCEEEEECCCCCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHHH
MFEAVNGLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVYHAGDPITISYYRAERARKIE
HHHHHCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHH
RRQVTVIVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGFSEWSGILVLAENSRYVPQIT
HHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCEEECCCCCCCEEEEECCCCCCHHHH
EAIRAAYRGSVEVMSFQGIANVINSIASAMEFIAFATSLAAFAVAVAGVAATMITSVIER
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREIGVMKALGFTDTQVLTIILLEGVIMSLIGAAIGIGLGIAGAYVLSSTGFTVRGVTMQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
FTIKAEPAITVDLIVSTLLITVSVGLIGGLFPAYRAARIPPAVALRYE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]