| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027526
Identifier: 124027526
GI number: 124027526
Start: 624779
End: 625816
Strand: Reverse
Name: 124027526
Synonym: Hbut_0644
Alternate gene names: NA
Gene position: 625816-624779 (Counterclockwise)
Preceding gene: 124027527
Following gene: 124027525
Centisome position: 37.54
GC content: 54.05
Gene sequence:
>1038_bases ATGCCCGTGTTCTTCTCCCTCTCGGCCCGCATACTCGTAAACCTCGAAGCACTCAACATGGCTGAGAGCGTAGGCAACGT TGTCAGACATCGTCGTGCTCCTGTGGTGCTCCGTACAGACAATGGGTTCGTGCTGCGCTACGTGCCGGTTATCAGTGGTG AGAGCCTAGCACATCACTACCAGAAGCTCCTAGCCGATATAGCTATCCAGAGGGGGCTACCGGTCTGCAGTGCTTGCAGT CAAGGCGTATTCCTAAAGCACGCTAATGATGATGTCTTTAAGAAGTATGACGGAATCGATGGTGCTAAGAACAAGTTTAA GACAGGAACCGATGCTGAAGAGTACGTAGTCAAGAACTGTGTTGTAGAGGATGTTGGTGGGTTCCTGTACACGGACAAGA CGGTAAAAAGGACTTCAAGATTCCGCGTAGGCTACATGGTTCCAGCGCTGGACGCCCTCGAGGCTGGTGCAGCAGCTACA GAAGCCCAGTTCCATGTAAGGTACTCGCCCGGTGCAAAGCAGGAGGAGCAGGCAATATACTACGTTGAGATTGGCAGTGC CGTCTACGTGTTCAGCTTCGCTCTCGACGCCTCGGGCGTGGGAGCTAGGAGCATGGAGAATGAGGGCGCCAGTAGCAGGA ACGAGTACATACTATCTCTTGAGGATAGGCTTAAGCGTGTAGAGGCAGCCTTCGACGCTCTAGCAGCACTGCTCGGCGGA ATGGCATGGGGCGCAAAGACCTCCAGGTTCCAGCCCCACTGGAAGATACTAAGCCTCGTAGCCTCGGTATCGCAGCCACT ACCCTTCAACGTGTCACCGGGCCACGATAAGAACTACGCTAGGGAGACAGTAGAGCGGGCATGCGCTATGACCTCTGTTG TGAAGGGCTTCAAGGCCAGCATAGTTTACTATAATGGCGAAGGTCTGATGGAGCCCGAGGGCTGCAATAATGTAAGCGTT GAGAAGGTTGGCAGCTATCTCGAGGCTATTAGACGCGCTAAGGAGGAGACGTTGGAGCTGCTGAGGGGCAAGTCTTGA
Upstream 100 bases:
>100_bases CTGCTCCTCGACAGCCATAGGGCTGAGGAAGGGCTCCGTCTAGCCCGTACAGCTGCCATACTCGCGCTCGGAAGATAGGC TCACGGGGGGTGAGGGCCAG
Downstream 100 bases:
>100_bases AGCCCCTAATGCTGGTATCTAAGGTAGAGCTTGCATGGGGGTTTAGCGTACGCTACGCTGGGGCTTCAGCTGCCCAGCCC GCCCTACCCATACCACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Autoregulator DevR Family; CRISPR-Associated Autoregulator Csa2 Family Protein; DevR Family CRISPR-Associated Autoregulator
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPVFFSLSARILVNLEALNMAESVGNVVRHRRAPVVLRTDNGFVLRYVPVISGESLAHHYQKLLADIAIQRGLPVCSACS QGVFLKHANDDVFKKYDGIDGAKNKFKTGTDAEEYVVKNCVVEDVGGFLYTDKTVKRTSRFRVGYMVPALDALEAGAAAT EAQFHVRYSPGAKQEEQAIYYVEIGSAVYVFSFALDASGVGARSMENEGASSRNEYILSLEDRLKRVEAAFDALAALLGG MAWGAKTSRFQPHWKILSLVASVSQPLPFNVSPGHDKNYARETVERACAMTSVVKGFKASIVYYNGEGLMEPEGCNNVSV EKVGSYLEAIRRAKEETLELLRGKS
Sequences:
>Translated_345_residues MPVFFSLSARILVNLEALNMAESVGNVVRHRRAPVVLRTDNGFVLRYVPVISGESLAHHYQKLLADIAIQRGLPVCSACS QGVFLKHANDDVFKKYDGIDGAKNKFKTGTDAEEYVVKNCVVEDVGGFLYTDKTVKRTSRFRVGYMVPALDALEAGAAAT EAQFHVRYSPGAKQEEQAIYYVEIGSAVYVFSFALDASGVGARSMENEGASSRNEYILSLEDRLKRVEAAFDALAALLGG MAWGAKTSRFQPHWKILSLVASVSQPLPFNVSPGHDKNYARETVERACAMTSVVKGFKASIVYYNGEGLMEPEGCNNVSV EKVGSYLEAIRRAKEETLELLRGKS >Mature_344_residues PVFFSLSARILVNLEALNMAESVGNVVRHRRAPVVLRTDNGFVLRYVPVISGESLAHHYQKLLADIAIQRGLPVCSACSQ GVFLKHANDDVFKKYDGIDGAKNKFKTGTDAEEYVVKNCVVEDVGGFLYTDKTVKRTSRFRVGYMVPALDALEAGAAATE AQFHVRYSPGAKQEEQAIYYVEIGSAVYVFSFALDASGVGARSMENEGASSRNEYILSLEDRLKRVEAAFDALAALLGGM AWGAKTSRFQPHWKILSLVASVSQPLPFNVSPGHDKNYARETVERACAMTSVVKGFKASIVYYNGEGLMEPEGCNNVSVE KVGSYLEAIRRAKEETLELLRGKS
Specific function: Unknown
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37826; Mature: 37694
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFFSLSARILVNLEALNMAESVGNVVRHRRAPVVLRTDNGFVLRYVPVISGESLAHHY CCEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCHHHHHH QKLLADIAIQRGLPVCSACSQGVFLKHANDDVFKKYDGIDGAKNKFKTGTDAEEYVVKNC HHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH VVEDVGGFLYTDKTVKRTSRFRVGYMVPALDALEAGAAATEAQFHVRYSPGAKQEEQAIY HHHHCCCEEEECHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE YVEIGSAVYVFSFALDASGVGARSMENEGASSRNEYILSLEDRLKRVEAAFDALAALLGG EEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH MAWGAKTSRFQPHWKILSLVASVSQPLPFNVSPGHDKNYARETVERACAMTSVVKGFKAS HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE IVYYNGEGLMEPEGCNNVSVEKVGSYLEAIRRAKEETLELLRGKS EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVFFSLSARILVNLEALNMAESVGNVVRHRRAPVVLRTDNGFVLRYVPVISGESLAHHY CEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCHHHHHH QKLLADIAIQRGLPVCSACSQGVFLKHANDDVFKKYDGIDGAKNKFKTGTDAEEYVVKNC HHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH VVEDVGGFLYTDKTVKRTSRFRVGYMVPALDALEAGAAATEAQFHVRYSPGAKQEEQAIY HHHHCCCEEEECHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE YVEIGSAVYVFSFALDASGVGARSMENEGASSRNEYILSLEDRLKRVEAAFDALAALLGG EEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH MAWGAKTSRFQPHWKILSLVASVSQPLPFNVSPGHDKNYARETVERACAMTSVVKGFKAS HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE IVYYNGEGLMEPEGCNNVSVEKVGSYLEAIRRAKEETLELLRGKS EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA