Click here to switch to the map view.

The map label for this gene is 124027525

Identifier: 124027525

GI number: 124027525

Start: 623949

End: 624782

Strand: Reverse

Name: 124027525

Synonym: Hbut_0643

Alternate gene names: NA

Gene position: 624782-623949 (Counterclockwise)

Preceding gene: 124027526

Following gene: 124027524

Centisome position: 37.48

GC content: 58.51

Gene sequence:

>834_bases
TTGAAGCCCCTAATGCTGGTATCTAAGGTAGAGCTTGCATGGGGGTTTAGCGTACGCTACGCTGGGGCTTCAGCTGCCCA
GCCCGCCCTACCCATACCACCACCAACAACAATTGTTGGCTTCTACGCTGAACCCCTCGCAAGGCTCCTCGGCCTAGCAG
AGTACAGGGGGTTTCCAGCGAAGCGCCCCTGTAGCCCCGCAGCGCTACTAGCAGAGCACACGCTCGCAGCCTCAGCAGGC
TTGAATTCTGATAGTAGGAGCGGCCTGGTAGTTCATAGTGATTTATCGCACGTGGCTACATTACCATACCAACGTAGGAG
GAAGACTGGCTGGGAGAAGCTGGCATTCGCAGCCCAGGCGGTGGGGGCGGCATATGGTCCCGCTGCACGCCTCTACCTGG
CACTGGTCGTTGACGTTGAAGGGTTATCCCGCAAGCTCGGCGAGACTGTAGAGTCGATCATCTCGGCTCTCGCCTGGGCC
GGATGGAGGCTTGGCTCCAAGGAGGGGCTAGTATCGGTCATCCATGCAGAGGCTGTGGAACCCGTGACACTCACGGGCGG
CGTCTTCGAGACAATACTCTACCAGGAGGGAGGCCTTGTAGAGCCCTTCTCGAAGGTGGAACTCATCAGAGACATCTACA
TGTGGAGGCTTGACCCCAAGCTACTCTGTGGCGGCGAGGCAATCCCAGACTACATTCTCTACCACATACCGGCAGCAGCC
TCCTCAACATCTTCGATACTCCTTCCCCCGCCCTCCACGGAGCTCCCAGGGTTTAGTCCAAGAAGCCGCGTCTACTGCCA
CCCATCCAAGCCGTTATGCGTAGCAGGGAGGTAG

Upstream 100 bases:

>100_bases
CCGAGGGCTGCAATAATGTAAGCGTTGAGAAGGTTGGCAGCTATCTCGAGGCTATTAGACGCGCTAAGGAGGAGACGTTG
GAGCTGCTGAGGGGCAAGTC

Downstream 100 bases:

>100_bases
CAGGGGTGGGTACATGCCATTCATTGTTGAGCTGTTTCCTCCGGGTTGGCTCGGCAGGGGATTCCAGCTACTAGCGCTAA
GCCTTGACCCGGGTAAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKPLMLVSKVELAWGFSVRYAGASAAQPALPIPPPTTIVGFYAEPLARLLGLAEYRGFPAKRPCSPAALLAEHTLAASAG
LNSDSRSGLVVHSDLSHVATLPYQRRRKTGWEKLAFAAQAVGAAYGPAARLYLALVVDVEGLSRKLGETVESIISALAWA
GWRLGSKEGLVSVIHAEAVEPVTLTGGVFETILYQEGGLVEPFSKVELIRDIYMWRLDPKLLCGGEAIPDYILYHIPAAA
SSTSSILLPPPSTELPGFSPRSRVYCHPSKPLCVAGR

Sequences:

>Translated_277_residues
MKPLMLVSKVELAWGFSVRYAGASAAQPALPIPPPTTIVGFYAEPLARLLGLAEYRGFPAKRPCSPAALLAEHTLAASAG
LNSDSRSGLVVHSDLSHVATLPYQRRRKTGWEKLAFAAQAVGAAYGPAARLYLALVVDVEGLSRKLGETVESIISALAWA
GWRLGSKEGLVSVIHAEAVEPVTLTGGVFETILYQEGGLVEPFSKVELIRDIYMWRLDPKLLCGGEAIPDYILYHIPAAA
SSTSSILLPPPSTELPGFSPRSRVYCHPSKPLCVAGR
>Mature_277_residues
MKPLMLVSKVELAWGFSVRYAGASAAQPALPIPPPTTIVGFYAEPLARLLGLAEYRGFPAKRPCSPAALLAEHTLAASAG
LNSDSRSGLVVHSDLSHVATLPYQRRRKTGWEKLAFAAQAVGAAYGPAARLYLALVVDVEGLSRKLGETVESIISALAWA
GWRLGSKEGLVSVIHAEAVEPVTLTGGVFETILYQEGGLVEPFSKVELIRDIYMWRLDPKLLCGGEAIPDYILYHIPAAA
SSTSSILLPPPSTELPGFSPRSRVYCHPSKPLCVAGR

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29614; Mature: 29614

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLMLVSKVELAWGFSVRYAGASAAQPALPIPPPTTIVGFYAEPLARLLGLAEYRGFPA
CCCCCEEEHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC
KRPCSPAALLAEHTLAASAGLNSDSRSGLVVHSDLSHVATLPYQRRRKTGWEKLAFAAQA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCHHHHHHCCHHHHHHHHHH
VGAAYGPAARLYLALVVDVEGLSRKLGETVESIISALAWAGWRLGSKEGLVSVIHAEAVE
HHHHCCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PVTLTGGVFETILYQEGGLVEPFSKVELIRDIYMWRLDPKLLCGGEAIPDYILYHIPAAA
CEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHEECCCCC
SSTSSILLPPPSTELPGFSPRSRVYCHPSKPLCVAGR
CCCCEEEECCCCCCCCCCCCCCCEEECCCCCEEECCC
>Mature Secondary Structure
MKPLMLVSKVELAWGFSVRYAGASAAQPALPIPPPTTIVGFYAEPLARLLGLAEYRGFPA
CCCCCEEEHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC
KRPCSPAALLAEHTLAASAGLNSDSRSGLVVHSDLSHVATLPYQRRRKTGWEKLAFAAQA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCHHHHHHCCHHHHHHHHHH
VGAAYGPAARLYLALVVDVEGLSRKLGETVESIISALAWAGWRLGSKEGLVSVIHAEAVE
HHHHCCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PVTLTGGVFETILYQEGGLVEPFSKVELIRDIYMWRLDPKLLCGGEAIPDYILYHIPAAA
CEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHEECCCCC
SSTSSILLPPPSTELPGFSPRSRVYCHPSKPLCVAGR
CCCCEEEECCCCCCCCCCCCCCCEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA