Click here to switch to the map view.

The map label for this gene is yaeB [C]

Identifier: 124027481

GI number: 124027481

Start: 568067

End: 568570

Strand: Direct

Name: yaeB [C]

Synonym: Hbut_0597

Alternate gene names: 124027481

Gene position: 568067-568570 (Clockwise)

Preceding gene: 124027479

Following gene: 124027482

Centisome position: 34.07

GC content: 50.79

Gene sequence:

>504_bases
TTGGAGATTAGGCTTCAGCCTATTGGTGTGGTTCGTGTTGATGCTAGTGACGAGGAGGTGAAGAAGGCTTTACATGGCGT
TGAAGGGGTTATAGAGGTTTTCCCGGAGTATGAGGCAGGGCTGAATGGTATTGAAGGGTTTTCCCACATAATAGTTATAG
CGTACCTACACAAAGTCACGGATGAGCAGAGGAGTGTCCTCCGGGTGCGACACCGTAGGCTTGAAAGGCTAGGTGTCGAC
CTTACCGGTATACCTGAGGTTGGCGTCTTCTGCACAGACTCGCCGCACCGGCCCAACCCTATAGCATTGAGTATAGTCGA
ACTAGTCGAGAGGAAGGGTAGGTTCCTAAGGGTACGAGGTCTAGACCTCTTCGATGGTACACCTGTATTGGACATTAAGG
GATACGATAGGACGAGGTGTATTAGGGAGATTAGGGTTCCCTGGTGGCTTGAAGAGCTCGAGAAAAGGGTTGGACGAGTA
CTGGGTGAGCCAAGCTTTCTCTGA

Upstream 100 bases:

>100_bases
TATGATGTTTGATACTGAATTAATACTATTTTATGCCCTATAGTATCTGTATGGCAACCTGCATCTCGCTCCATGATTTA
CACGACGTGGTGATATGGAG

Downstream 100 bases:

>100_bases
AGAATGGTTTGCCGGATGCAACTTTGCAATGCAACCCCCATGGCTGTAATGAATCCAGGTTGGCACCCGGATCCCTACCC
GGTGCCTAGCTACAACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MEIRLQPIGVVRVDASDEEVKKALHGVEGVIEVFPEYEAGLNGIEGFSHIIVIAYLHKVTDEQRSVLRVRHRRLERLGVD
LTGIPEVGVFCTDSPHRPNPIALSIVELVERKGRFLRVRGLDLFDGTPVLDIKGYDRTRCIREIRVPWWLEELEKRVGRV
LGEPSFL

Sequences:

>Translated_167_residues
MEIRLQPIGVVRVDASDEEVKKALHGVEGVIEVFPEYEAGLNGIEGFSHIIVIAYLHKVTDEQRSVLRVRHRRLERLGVD
LTGIPEVGVFCTDSPHRPNPIALSIVELVERKGRFLRVRGLDLFDGTPVLDIKGYDRTRCIREIRVPWWLEELEKRVGRV
LGEPSFL
>Mature_167_residues
MEIRLQPIGVVRVDASDEEVKKALHGVEGVIEVFPEYEAGLNGIEGFSHIIVIAYLHKVTDEQRSVLRVRHRRLERLGVD
LTGIPEVGVFCTDSPHRPNPIALSIVELVERKGRFLRVRGLDLFDGTPVLDIKGYDRTRCIREIRVPWWLEELEKRVGRV
LGEPSFL

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=103, Percent_Identity=36.8932038834951, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786393, Length=119, Percent_Identity=36.9747899159664, Blast_Score=62, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586408, Length=139, Percent_Identity=36.6906474820144, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45552503, Length=139, Percent_Identity=36.6906474820144, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 19070; Mature: 19070

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRLQPIGVVRVDASDEEVKKALHGVEGVIEVFPEYEAGLNGIEGFSHIIVIAYLHKVT
CEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
DEQRSVLRVRHRRLERLGVDLTGIPEVGVFCTDSPHRPNPIALSIVELVERKGRFLRVRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC
LDLFDGTPVLDIKGYDRTRCIREIRVPWWLEELEKRVGRVLGEPSFL
CEEECCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEIRLQPIGVVRVDASDEEVKKALHGVEGVIEVFPEYEAGLNGIEGFSHIIVIAYLHKVT
CEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
DEQRSVLRVRHRRLERLGVDLTGIPEVGVFCTDSPHRPNPIALSIVELVERKGRFLRVRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC
LDLFDGTPVLDIKGYDRTRCIREIRVPWWLEELEKRVGRVLGEPSFL
CEEECCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]