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The map label for this gene is ribC [H]

Identifier: 124027444

GI number: 124027444

Start: 533900

End: 534373

Strand: Direct

Name: ribC [H]

Synonym: Hbut_0559

Alternate gene names: 124027444

Gene position: 533900-534373 (Clockwise)

Preceding gene: 124027443

Following gene: 124027445

Centisome position: 32.02

GC content: 54.43

Gene sequence:

>474_bases
GTGAAGATATGTATTGTCGATACAACCTTTGCAAGAATAGACATGGCTAGGTATGCGATAGAGGTTCTCCAAAACCTCAT
GCCTGACGCAGTTATAGTCCGTAGGACGGTGCCGGGGATAAAGGACATCCCGGTTGAGATCAAGACGCTGATGCAGCGTG
AGGGCTGCGAGGCAGGCATGGTTTTTGGCTGGGTTGGACGCAGCCTGGTTGACAAGATAAGTTATGCAGTATACTCTCTC
GCGCTCCAGCTGGTGCAGCTCGAGCTGGGCCGCCACATTATAGACGTTACTGTGCACGAGGACGAGTCCGAGAGCGAAGA
GGAGCTCTACAGAATAGCGGCTGACAGGGCTAGGAAGCACGCCGAGAACCTTTACCTTCTACTCCGCAGGCCCGAGGAGC
TAGTGAGACGTGCTGGTACAGGTAGGCGTCAAGGCTATCCTGATGCAGGCCCTATAATGGGCGGGTATGGCTAG

Upstream 100 bases:

>100_bases
GGCGAGGCTTTGAGCGTGGAGGAGGCCCGCAGGGTATCTAGGGAGAAGGGCTACCCCCTGGTGGAGGGGAGTGAGATTAT
AGCAGAGGTGGAGCGTCGTG

Downstream 100 bases:

>100_bases
CCAAGCATTTTTCCCCGCCAAGGCCTAAGGCTCACTGGGCTACGGGGTGTAGAGAGCAGTGTCTGCAGCTGATGTGAGGC
TTGCATTTGTTGTAGCGGAA

Product: riboflavin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKICIVDTTFARIDMARYAIEVLQNLMPDAVIVRRTVPGIKDIPVEIKTLMQREGCEAGMVFGWVGRSLVDKISYAVYSL
ALQLVQLELGRHIIDVTVHEDESESEEELYRIAADRARKHAENLYLLLRRPEELVRRAGTGRRQGYPDAGPIMGGYG

Sequences:

>Translated_157_residues
MKICIVDTTFARIDMARYAIEVLQNLMPDAVIVRRTVPGIKDIPVEIKTLMQREGCEAGMVFGWVGRSLVDKISYAVYSL
ALQLVQLELGRHIIDVTVHEDESESEEELYRIAADRARKHAENLYLLLRRPEELVRRAGTGRRQGYPDAGPIMGGYG
>Mature_157_residues
MKICIVDTTFARIDMARYAIEVLQNLMPDAVIVRRTVPGIKDIPVEIKTLMQREGCEAGMVFGWVGRSLVDKISYAVYSL
ALQLVQLELGRHIIDVTVHEDESESEEELYRIAADRARKHAENLYLLLRRPEELVRRAGTGRRQGYPDAGPIMGGYG

Specific function: Unknown

COG id: COG1731

COG function: function code H; Archaeal riboflavin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002180
- InterPro:   IPR006399 [H]

Pfam domain/function: PF00885 DMRL_synthase [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 17745; Mature: 17745

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICIVDTTFARIDMARYAIEVLQNLMPDAVIVRRTVPGIKDIPVEIKTLMQREGCEAGM
CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHCCCCCCH
VFGWVGRSLVDKISYAVYSLALQLVQLELGRHIIDVTVHEDESESEEELYRIAADRARKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
AENLYLLLRRPEELVRRAGTGRRQGYPDAGPIMGGYG
HHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKICIVDTTFARIDMARYAIEVLQNLMPDAVIVRRTVPGIKDIPVEIKTLMQREGCEAGM
CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHCCCCCCH
VFGWVGRSLVDKISYAVYSLALQLVQLELGRHIIDVTVHEDESESEEELYRIAADRARKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
AENLYLLLRRPEELVRRAGTGRRQGYPDAGPIMGGYG
HHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]