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The map label for this gene is 124027439

Identifier: 124027439

GI number: 124027439

Start: 530676

End: 531134

Strand: Direct

Name: 124027439

Synonym: Hbut_0554

Alternate gene names: NA

Gene position: 530676-531134 (Clockwise)

Preceding gene: 124027438

Following gene: 124027440

Centisome position: 31.83

GC content: 51.42

Gene sequence:

>459_bases
TTGTCTCGGATACCTACACGCGTCGTTGGCGTAGAGATATCAGTGCATGCACATGCGACAGAGGATGTTGGGAGGGTTAA
GCAGGCAGTACTCAACCTACTACCAGAGAGTGTTCATGATAAGGCTGTCTTTGAAGAGCAGGTTCTCGAAGGCCACCACG
GCAACCCTATAACCCGTATACGCCTCAGGCTCCGGGACCGTGATGCAGAGGAGTTTATCAAGCATCTGGCATCGATGCTT
AGTGATACTGAGAAGAGGGTTCTCCGTGCAATGCTTGGTGATAGGTATGATGAGAGACAGGGCAGAATGTACATTAGGCT
TAGCAAACAAGATGCTTTCCTCGGCGATGCAAGACTCTACGATGGTGATGACGTGGTGCATATAGTGATTATTCTCCGGG
GCTCGCCCAAGCTTGAAGAAGTAGCACGCGTACTTGGTGAGCTGGGGCTGCTGGCGTGA

Upstream 100 bases:

>100_bases
ACCTTACATTCTATATGGCTAGCCCCCAGTTTTTATCTCGGAGAGGCAGGGGAGTACTCGGCGATGTCTCCTACATCCTC
CTCTGCGTGGTGGCCCGCTC

Downstream 100 bases:

>100_bases
GGGCCTGCGATCTTAACGTCGCGCCTACCAGCGTTAACGAAGCTAGGCGTATGGCTAAGCTGTTAAAGGGTATGGGTGTT
GGCTGTGTCGCTGTGGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSRIPTRVVGVEISVHAHATEDVGRVKQAVLNLLPESVHDKAVFEEQVLEGHHGNPITRIRLRLRDRDAEEFIKHLASML
SDTEKRVLRAMLGDRYDERQGRMYIRLSKQDAFLGDARLYDGDDVVHIVIILRGSPKLEEVARVLGELGLLA

Sequences:

>Translated_152_residues
MSRIPTRVVGVEISVHAHATEDVGRVKQAVLNLLPESVHDKAVFEEQVLEGHHGNPITRIRLRLRDRDAEEFIKHLASML
SDTEKRVLRAMLGDRYDERQGRMYIRLSKQDAFLGDARLYDGDDVVHIVIILRGSPKLEEVARVLGELGLLA
>Mature_151_residues
SRIPTRVVGVEISVHAHATEDVGRVKQAVLNLLPESVHDKAVFEEQVLEGHHGNPITRIRLRLRDRDAEEFIKHLASMLS
DTEKRVLRAMLGDRYDERQGRMYIRLSKQDAFLGDARLYDGDDVVHIVIILRGSPKLEEVARVLGELGLLA

Specific function: Unknown

COG id: COG1325

COG function: function code J; Predicted exosome subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022803
- InterPro:   IPR002739 [H]

Pfam domain/function: PF01877 DUF54 [H]

EC number: NA

Molecular weight: Translated: 17225; Mature: 17094

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIPTRVVGVEISVHAHATEDVGRVKQAVLNLLPESVHDKAVFEEQVLEGHHGNPITRI
CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEE
RLRLRDRDAEEFIKHLASMLSDTEKRVLRAMLGDRYDERQGRMYIRLSKQDAFLGDARLY
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEE
DGDDVVHIVIILRGSPKLEEVARVLGELGLLA
CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRIPTRVVGVEISVHAHATEDVGRVKQAVLNLLPESVHDKAVFEEQVLEGHHGNPITRI
CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEE
RLRLRDRDAEEFIKHLASMLSDTEKRVLRAMLGDRYDERQGRMYIRLSKQDAFLGDARLY
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEE
DGDDVVHIVIILRGSPKLEEVARVLGELGLLA
CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]