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The map label for this gene is rpl15e [H]

Identifier: 124027438

GI number: 124027438

Start: 529877

End: 530557

Strand: Direct

Name: rpl15e [H]

Synonym: Hbut_0553

Alternate gene names: 124027438

Gene position: 529877-530557 (Clockwise)

Preceding gene: 124027437

Following gene: 124027439

Centisome position: 31.78

GC content: 56.68

Gene sequence:

>681_bases
ATGGCGCGCGGTCTATACCACTATCTGCGGGAGATGTGGAAGCAGCGTCACGACATTCCGGAGCTCGCTGAGCTGTGGAA
GAGGAGGATAATGGAGTGGAGGCGTCAGCCAAGCGTAGTGCGTATCGAGAAACCCACACGCATTGACCGCGCCAGGGCGC
TGGGATACAAGGCTAAGCAGGGCATTATCGTCGTAAGGGTGCGCGTAAGGAAGGGTGGTCTGAACAGGCCGAGGCCAAAC
AAGGGTCGTAGGCCAAAGAGGATGGGTGTCTATGGCTACGCTCCTGCAAAGTCTACAAGGCTCATAGCTGAGGAAAGGGC
GGCCCGCAAGTACCCCAACATGGAGGTCCTCAACAGCTACTATGTTGGCGAGGACGGCGAGTACAAGTGGTACGAAGTCA
TACTGGTTGACCGCAGCCACCCAGCAGTATGCAGAGACAAGGACCTGGGCTGGATATGCGAGAAGCAGCACCGCGGCAGA
GTATTCAGAGGCCTAACAAGCGCAGGCAAGAAGATGCGCGGTCTGAGGAAGACACGTGGCCTACGCGGTACACACAAGTA
CAAGTGGAAGAAGAAGCAGAAGGAGCGCAAACTCAAGAAGCGCCACGAGGCACACCGCGGTGCAAGGCTCATTGCTCCAG
ACGAGATACGCGAAAAGTACCACAAGGGAGACCTAAAGTAG

Upstream 100 bases:

>100_bases
TTCGGAGGACAGTCAGTACGTAGCTTTTGGCCTAGCTACGCTTTTAATAGGGCCTAGCATGCTAGCTGGTCTCCTCTGGG
TGCTTGGAAGGGGAACGCTA

Downstream 100 bases:

>100_bases
CTCTCTACGAGCCGTGCTACCTTACATTCTATATGGCTAGCCCCCAGTTTTTATCTCGGAGAGGCAGGGGAGTACTCGGC
GATGTCTCCTACATCCTCCT

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MARGLYHYLREMWKQRHDIPELAELWKRRIMEWRRQPSVVRIEKPTRIDRARALGYKAKQGIIVVRVRVRKGGLNRPRPN
KGRRPKRMGVYGYAPAKSTRLIAEERAARKYPNMEVLNSYYVGEDGEYKWYEVILVDRSHPAVCRDKDLGWICEKQHRGR
VFRGLTSAGKKMRGLRKTRGLRGTHKYKWKKKQKERKLKKRHEAHRGARLIAPDEIREKYHKGDLK

Sequences:

>Translated_226_residues
MARGLYHYLREMWKQRHDIPELAELWKRRIMEWRRQPSVVRIEKPTRIDRARALGYKAKQGIIVVRVRVRKGGLNRPRPN
KGRRPKRMGVYGYAPAKSTRLIAEERAARKYPNMEVLNSYYVGEDGEYKWYEVILVDRSHPAVCRDKDLGWICEKQHRGR
VFRGLTSAGKKMRGLRKTRGLRGTHKYKWKKKQKERKLKKRHEAHRGARLIAPDEIREKYHKGDLK
>Mature_225_residues
ARGLYHYLREMWKQRHDIPELAELWKRRIMEWRRQPSVVRIEKPTRIDRARALGYKAKQGIIVVRVRVRKGGLNRPRPNK
GRRPKRMGVYGYAPAKSTRLIAEERAARKYPNMEVLNSYYVGEDGEYKWYEVILVDRSHPAVCRDKDLGWICEKQHRGRV
FRGLTSAGKKMRGLRKTRGLRGTHKYKWKKKQKERKLKKRHEAHRGARLIAPDEIREKYHKGDLK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family [H]

Homologues:

Organism=Homo sapiens, GI15431293, Length=177, Percent_Identity=45.7627118644068, Blast_Score=140, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17541432, Length=199, Percent_Identity=44.2211055276382, Blast_Score=120, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6323057, Length=184, Percent_Identity=44.5652173913043, Blast_Score=141, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6323769, Length=184, Percent_Identity=44.5652173913043, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678 [H]

Pfam domain/function: PF00827 Ribosomal_L15e [H]

EC number: NA

Molecular weight: Translated: 27033; Mature: 26902

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGLYHYLREMWKQRHDIPELAELWKRRIMEWRRQPSVVRIEKPTRIDRARALGYKAKQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCC
GIIVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPNMEVLNSY
CEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHE
YVGEDGEYKWYEVILVDRSHPAVCRDKDLGWICEKQHRGRVFRGLTSAGKKMRGLRKTRG
ECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
LRGTHKYKWKKKQKERKLKKRHEAHRGARLIAPDEIREKYHKGDLK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARGLYHYLREMWKQRHDIPELAELWKRRIMEWRRQPSVVRIEKPTRIDRARALGYKAKQ
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCC
GIIVVRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPNMEVLNSY
CEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHE
YVGEDGEYKWYEVILVDRSHPAVCRDKDLGWICEKQHRGRVFRGLTSAGKKMRGLRKTRG
ECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
LRGTHKYKWKKKQKERKLKKRHEAHRGARLIAPDEIREKYHKGDLK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA