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The map label for this gene is yddH [H]

Identifier: 124027404

GI number: 124027404

Start: 500578

End: 501171

Strand: Direct

Name: yddH [H]

Synonym: Hbut_0517

Alternate gene names: 124027404

Gene position: 500578-501171 (Clockwise)

Preceding gene: 124027402

Following gene: 124027405

Centisome position: 30.03

GC content: 53.7

Gene sequence:

>594_bases
TTGCCAGGTGTGCCGGGCGGCTATGTTGAGGCAGGTGATAAGTGGTACTACATCCTCCACCCGCGTCCCGCCTACATACT
TGTAACAGAGTATGGTGGCCGAGTAAACTTCATGGCTGCTTCCTGGGTTATGCCGTTGAGTGAGGATCCGCCAAGGATAG
TGGCAGCTCTTGACAAAGCATCATTCACGATGGAGCTTATACTTAGCTCAAAGGCTTTCACGGTTAACGTATTAACGATC
GATCATGTAGACTTCATATACGCTGCCGGCACCACCAGCGGTAGGAGGGTGGATAAGCTAGCAGTCCTCGGGGCCGAGAT
CTCAAGAGATACCGTTACCGGGGTTCCGAGGCTCTCAAAGCCCAGGCCCATAGGCGTTATAGAGGCAAGCGTCTACCGCG
TCTACAGCGACGTGGCAGAGGACGTCCATCTAATCGTGGCGGATGTCGTTGCAGCATACGCCGATCCGGAGTTCTTCAAC
GAGAAGTATGGCTGGGATCTCAGGAAGGCACGTATAGCAATACATGCAGCTGGCCGAGCCTTCACGATACCTGGCGGGCT
TTACATTGCTAAGAAGCTTGCGGCGAAACATTAG

Upstream 100 bases:

>100_bases
TGCGGGGAGTTGATTACTCGACAATTGGTGGCTCACGCCTCAGCTGAGGGTAGGCTAAAGCCCTCCAATCTCGAGTATAC
TGGTGACACGGTGTTAGTCT

Downstream 100 bases:

>100_bases
TAAACCCGAAACAGCTTCGGAGTCCTTTGGGTTGTGTGAAGTTATAACCCTTTAGATGCTCCAAGCTTACAATCGGGCAC
GCCGCATAGAGGGTGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPGVPGGYVEAGDKWYYILHPRPAYILVTEYGGRVNFMAASWVMPLSEDPPRIVAALDKASFTMELILSSKAFTVNVLTI
DHVDFIYAAGTTSGRRVDKLAVLGAEISRDTVTGVPRLSKPRPIGVIEASVYRVYSDVAEDVHLIVADVVAAYADPEFFN
EKYGWDLRKARIAIHAAGRAFTIPGGLYIAKKLAAKH

Sequences:

>Translated_197_residues
MPGVPGGYVEAGDKWYYILHPRPAYILVTEYGGRVNFMAASWVMPLSEDPPRIVAALDKASFTMELILSSKAFTVNVLTI
DHVDFIYAAGTTSGRRVDKLAVLGAEISRDTVTGVPRLSKPRPIGVIEASVYRVYSDVAEDVHLIVADVVAAYADPEFFN
EKYGWDLRKARIAIHAAGRAFTIPGGLYIAKKLAAKH
>Mature_196_residues
PGVPGGYVEAGDKWYYILHPRPAYILVTEYGGRVNFMAASWVMPLSEDPPRIVAALDKASFTMELILSSKAFTVNVLTID
HVDFIYAAGTTSGRRVDKLAVLGAEISRDTVTGVPRLSKPRPIGVIEASVYRVYSDVAEDVHLIVADVVAAYADPEFFNE
KYGWDLRKARIAIHAAGRAFTIPGGLYIAKKLAAKH

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=171, Percent_Identity=28.6549707602339, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21554; Mature: 21423

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGVPGGYVEAGDKWYYILHPRPAYILVTEYGGRVNFMAASWVMPLSEDPPRIVAALDKA
CCCCCCCEEECCCEEEEEECCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCEEEECCCC
SFTMELILSSKAFTVNVLTIDHVDFIYAAGTTSGRRVDKLAVLGAEISRDTVTGVPRLSK
CEEEEEEECCCCEEEEEEEEECEEEEEEECCCCCCEEHEEEEECCCCCCCCCCCCCCCCC
PRPIGVIEASVYRVYSDVAEDVHLIVADVVAAYADPEFFNEKYGWDLRKARIAIHAAGRA
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHEEEEEEECCCE
FTIPGGLYIAKKLAAKH
EECCCCHHHHHHHHCCC
>Mature Secondary Structure 
PGVPGGYVEAGDKWYYILHPRPAYILVTEYGGRVNFMAASWVMPLSEDPPRIVAALDKA
CCCCCCEEECCCEEEEEECCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCEEEECCCC
SFTMELILSSKAFTVNVLTIDHVDFIYAAGTTSGRRVDKLAVLGAEISRDTVTGVPRLSK
CEEEEEEECCCCEEEEEEEEECEEEEEEECCCCCCEEHEEEEECCCCCCCCCCCCCCCCC
PRPIGVIEASVYRVYSDVAEDVHLIVADVVAAYADPEFFNEKYGWDLRKARIAIHAAGRA
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHEEEEEEECCCE
FTIPGGLYIAKKLAAKH
EECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]