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The map label for this gene is ybcL [C]

Identifier: 124027377

GI number: 124027377

Start: 469268

End: 469783

Strand: Direct

Name: ybcL [C]

Synonym: Hbut_0490

Alternate gene names: 124027377

Gene position: 469268-469783 (Clockwise)

Preceding gene: 124027376

Following gene: 124027379

Centisome position: 28.15

GC content: 53.88

Gene sequence:

>516_bases
ATGATATTGTTTCGTAGAAAACATAGAGACTACCTAGTGCGTGTCGGCGCAGAGTTTAGCCTATTGTCTCCTGCCTTCGG
CGATGGGGAGAGGATACCGGTAAAGTATACCTGCGATGGTGACGATGTCTCGCCTCCGCTTGAGTGGAGCGGGCAGCCAG
GCTCGGCTGCAAGCTACCTACTCATAGTCTATGATCCCGACGCGCCGCTAGGCACGTTCATACACTGGGTGCTCTACGAT
ATACCCGGCCAAGTAACAGCTCTGCCTGAAGGAGTGCCCAGGGATCCCGTAATTGAGGGTCTAGGTATTCAGGGACGGAA
CGATTTCGGGGGCATCGGCTACGGTGGACCCTGTCCTCCATCTGGCGATAAGCCGCACCGATACATCTTCGCGCTCCATG
CACTTAGTGTAGAAAGTCTTGAATTAAAACCAGGTGCGACGGCTGCGGAGGTTCTTGAGCGTGCACGACAATACGTTGTA
GGTTATGCGGTACTTGTCGGAACGTATTCCAGATAG

Upstream 100 bases:

>100_bases
ACAGTGGAAGCCGGCTACATAATCTAGACACGGGCTAGGCTTGTTTAGCGTTACATCTAAATCTAAAGCTTGCGGTATGA
GAGTGTACGGTGTGGACTAG

Downstream 100 bases:

>100_bases
GCTCTATGTTCCTTCTTTGCCGGTTGTGGAGGAGCCCAATCTACATATGGTATGGTTCTGGGATAGTGATATACAAGTTG
ATTTAGGCTCCGAGCTGGAA

Product: phosphatidyl ethanolamine-binding protein (PEBP)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MILFRRKHRDYLVRVGAEFSLLSPAFGDGERIPVKYTCDGDDVSPPLEWSGQPGSAASYLLIVYDPDAPLGTFIHWVLYD
IPGQVTALPEGVPRDPVIEGLGIQGRNDFGGIGYGGPCPPSGDKPHRYIFALHALSVESLELKPGATAAEVLERARQYVV
GYAVLVGTYSR

Sequences:

>Translated_171_residues
MILFRRKHRDYLVRVGAEFSLLSPAFGDGERIPVKYTCDGDDVSPPLEWSGQPGSAASYLLIVYDPDAPLGTFIHWVLYD
IPGQVTALPEGVPRDPVIEGLGIQGRNDFGGIGYGGPCPPSGDKPHRYIFALHALSVESLELKPGATAAEVLERARQYVV
GYAVLVGTYSR
>Mature_171_residues
MILFRRKHRDYLVRVGAEFSLLSPAFGDGERIPVKYTCDGDDVSPPLEWSGQPGSAASYLLIVYDPDAPLGTFIHWVLYD
IPGQVTALPEGVPRDPVIEGLGIQGRNDFGGIGYGGPCPPSGDKPHRYIFALHALSVESLELKPGATAAEVLERARQYVV
GYAVLVGTYSR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=143, Percent_Identity=41.2587412587413, Blast_Score=107, Evalue=3e-25,
Organism=Escherichia coli, GI1786990, Length=159, Percent_Identity=35.2201257861635, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18558; Mature: 18558

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFRRKHRDYLVRVGAEFSLLSPAFGDGERIPVKYTCDGDDVSPPLEWSGQPGSAASYL
CEEEECCCCCEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
LIVYDPDAPLGTFIHWVLYDIPGQVTALPEGVPRDPVIEGLGIQGRNDFGGIGYGGPCPP
EEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
SGDKPHRYIFALHALSVESLELKPGATAAEVLERARQYVVGYAVLVGTYSR
CCCCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MILFRRKHRDYLVRVGAEFSLLSPAFGDGERIPVKYTCDGDDVSPPLEWSGQPGSAASYL
CEEEECCCCCEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
LIVYDPDAPLGTFIHWVLYDIPGQVTALPEGVPRDPVIEGLGIQGRNDFGGIGYGGPCPP
EEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
SGDKPHRYIFALHALSVESLELKPGATAAEVLERARQYVVGYAVLVGTYSR
CCCCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]