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The map label for this gene is rps17e [H]

Identifier: 124027369

GI number: 124027369

Start: 459656

End: 459967

Strand: Direct

Name: rps17e [H]

Synonym: Hbut_0482

Alternate gene names: 124027369

Gene position: 459656-459967 (Clockwise)

Preceding gene: 124027363

Following gene: 124027370

Centisome position: 27.57

GC content: 47.76

Gene sequence:

>312_bases
ATGGGCAAGGTCAGGATAGGCCTTGTAAAGCGTACAGCTAGGAAGCTCGTAGAAATGTATCCCGACATCTTCACAGAGGA
TTTTGAACATAATAAGCGTATAGTATCACAGCTTATAGAGACTCCGTCGAAGAAGCTTAGGAACCAAATAGCAGGCTACG
TTACAAGGCTCATTAGGCTGTACAAGCGTACCGGTGAGCTACAATACCTCATAGAGCAGCAGCATGCGGAGGAGTTTAGA
GCAGCCCTCTTCCAACAACAGCAAGAACAGCCCAGCGGGCAAGCAGAACAGCAGAGCCAACAAACACAATAG

Upstream 100 bases:

>100_bases
TCGGGGTGCTTCTATATAAGTGTTACTGTCAAGGCTTGCTTGGAGGGTCAGAAATATGTGCCTCTACACTCTGCAGCCCT
AGCCCACTGGGGGGCACTGC

Downstream 100 bases:

>100_bases
ATAGTCAATATCCTTGACAGCACTTGTTGCATGGGAACGCCTGCAAGCTGTTAGAGTATTTGCACTTCTTAGGCCCTTGT
TTGCTACACATTGCAATATA

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR
AALFQQQQEQPSGQAEQQSQQTQ

Sequences:

>Translated_103_residues
MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR
AALFQQQQEQPSGQAEQQSQQTQ
>Mature_102_residues
GKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFRA
ALFQQQQEQPSGQAEQQSQQTQ

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001210
- InterPro:   IPR018273 [H]

Pfam domain/function: PF00833 Ribosomal_S17e [H]

EC number: NA

Molecular weight: Translated: 12163; Mature: 12032

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
YKRTGELQYLIEQQHAEEFRAALFQQQQEQPSGQAEQQSQQTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
GKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
YKRTGELQYLIEQQHAEEFRAALFQQQQEQPSGQAEQQSQQTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA