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The map label for this gene is rps8e

Identifier: 124027344

GI number: 124027344

Start: 437470

End: 437880

Strand: Reverse

Name: rps8e

Synonym: Hbut_0453

Alternate gene names: 124027344

Gene position: 437880-437470 (Counterclockwise)

Preceding gene: 124027345

Following gene: 124027340

Centisome position: 26.26

GC content: 50.12

Gene sequence:

>411_bases
ATGGGCGTTTACCATGGTAACGACCTAAAGAAGCCTACGGGCGGCAAGAAGCGTCCGCACCAGAAGGTTAAGAGGAAGTA
CTGGATGGGCAGATATCCAACATTCACAAGGCTAGATAACCGCGACGTAAGGGTCCACATAAGGGTTCGCGGTGGAAACT
ATAAGATAAGGCTGAAGAGAGCTGCGTATGCAAATGTCATCGATCCGGAGACTAATACAGCGCGTAAAGTTCGCATTCTA
AGAGTTGTTGAGACACCAGCAAACCCGCACTATGCGCGTGCAAACATAATAGTTAAGGGTACAATCATAGAGACGGAGCT
TGGTAAGGCTGTGGTAACATCGAGGCCCGGCCAGGACGGAGTCATAAATGCTGTACTGATAGAGAAGCGTAGCGAGAGGC
CAGCAGGCTAG

Upstream 100 bases:

>100_bases
ATACACCGAGCTGCCACATTATACCGAGCTGCTCAGCGGCGGAGAGAACTTATAGGCAGCCAGGCAGCTGCGCCAATAAC
CACTAGGGGGCGAAGGCTAG

Downstream 100 bases:

>100_bases
GCGGGTAAGACGCTTACCTGGTTTTACTCGACCTTGACGGTGCAAGGGATGTCTCTATTTAGGTAGTAGACTTGCAAGCC
TCTGTATTCTTGCCAGTGCC

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MGVYHGNDLKKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKRAAYANVIDPETNTARKVRIL
RVVETPANPHYARANIIVKGTIIETELGKAVVTSRPGQDGVINAVLIEKRSERPAG

Sequences:

>Translated_136_residues
MGVYHGNDLKKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKRAAYANVIDPETNTARKVRIL
RVVETPANPHYARANIIVKGTIIETELGKAVVTSRPGQDGVINAVLIEKRSERPAG
>Mature_135_residues
GVYHGNDLKKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKRAAYANVIDPETNTARKVRILR
VVETPANPHYARANIIVKGTIIETELGKAVVTSRPGQDGVINAVLIEKRSERPAG

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_HYPBU (A2BK08)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001012664.1
- ProteinModelPortal:   A2BK08
- STRING:   A2BK08
- GeneID:   4782660
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0453
- eggNOG:   arNOG11360
- HOGENOM:   HBG745393
- OMA:   NVYIPKE
- ProtClustDB:   PRK04049
- BioCyc:   HBUT415426:HBUT_0453-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 15437; Mature: 15306

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVYHGNDLKKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCEEEEEEC
AAYANVIDPETNTARKVRILRVVETPANPHYARANIIVKGTIIETELGKAVVTSRPGQDG
CCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCEEEECCCCCCC
VINAVLIEKRSERPAG
EEEEEEEECCCCCCCC
>Mature Secondary Structure 
GVYHGNDLKKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKR
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCEEEEEEC
AAYANVIDPETNTARKVRILRVVETPANPHYARANIIVKGTIIETELGKAVVTSRPGQDG
CCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCEEEECCCCCCC
VINAVLIEKRSERPAG
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA