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The map label for this gene is 124027329

Identifier: 124027329

GI number: 124027329

Start: 423857

End: 424069

Strand: Reverse

Name: 124027329

Synonym: Hbut_0438

Alternate gene names: NA

Gene position: 424069-423857 (Counterclockwise)

Preceding gene: 124027330

Following gene: 124027328

Centisome position: 25.44

GC content: 50.23

Gene sequence:

>213_bases
TTGGGTAGGCGGGTAAAGGTGCCACCATTCAAGGCTTGTAGACGGTGTAAGAGCCTTGTACCCCGTGAGGCTACACGCTG
CTCTGTTTGTGGCTCTACGGACCTCACTGAGGATTGGGAAGGTGTAGTCATAATTCTTGACCCTGAGAAGTCTTTGATAG
CTAAGAAGCTCGAGATAACAAGGCCTGGAAGGTATGCGCTTAAAGTGAGGTGA

Upstream 100 bases:

>100_bases
GAGAATACAGTTAACCATGAGGCAACCATACCTCGGCAAGACTGAGTGGCATAAGCGTAAGAGGATCGAGGCTAAGTAGA
CCTCAAAGGGGTGATAGATC

Downstream 100 bases:

>100_bases
AGAGGCGAAAGTGTACCATCTTTTCCATAGCCGTCTCTGTCTTCCCCAGGGCCTACGCTCCCTCCTAGCTCAGCGTATGC
CTGCCGCCAAATTGTTGCCA

Product: DNA-directed RNA polymerase subunit E''

Products: diphosphate; RNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MGRRVKVPPFKACRRCKSLVPREATRCSVCGSTDLTEDWEGVVIILDPEKSLIAKKLEITRPGRYALKVR

Sequences:

>Translated_70_residues
MGRRVKVPPFKACRRCKSLVPREATRCSVCGSTDLTEDWEGVVIILDPEKSLIAKKLEITRPGRYALKVR
>Mature_69_residues
GRRVKVPPFKACRRCKSLVPREATRCSVCGSTDLTEDWEGVVIILDPEKSLIAKKLEITRPGRYALKVR

Specific function: Unknown

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 7929; Mature: 7797

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRVKVPPFKACRRCKSLVPREATRCSVCGSTDLTEDWEGVVIILDPEKSLIAKKLEIT
CCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC
RPGRYALKVR
CCCCEEEEEC
>Mature Secondary Structure 
GRRVKVPPFKACRRCKSLVPREATRCSVCGSTDLTEDWEGVVIILDPEKSLIAKKLEIT
CCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC
RPGRYALKVR
CCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA