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The map label for this gene is rps3Ae [H]

Identifier: 124027319

GI number: 124027319

Start: 417415

End: 418062

Strand: Reverse

Name: rps3Ae [H]

Synonym: Hbut_0428

Alternate gene names: 124027319

Gene position: 418062-417415 (Counterclockwise)

Preceding gene: 124027320

Following gene: 124027318

Centisome position: 25.08

GC content: 49.38

Gene sequence:

>648_bases
ATGAGTCGTAGGGCGGTTAGCATCCGCGACAAGTGGAGGCTCAAGAAGTGGTATGAGGTTATAGCACCGCCCGTGTTTGG
TAACGTAGTGTTGGGTACCACGCCAGCTGACGATCCAAGAAAGCTGATAGGCAGGGTTATGGAGACGACGCTATACGACA
TAACCGGCGACTTCTCGCTAGTACATGTCCACCTCTTCTTCCAGATTGTAGATGTCGATGAGGAGAACTTGAAAGCCTAC
ACGAGGTTTAAGGGTCACGAGCTGGCAAGGGACTACATGAAGAGCCTCATAAGGAGGAAGAGTAGCAAGATACAGGGTAT
ATTCAACGTGCAGACCAAGGATGGCTATGGGCTGAGGATAACCGGTGTAGTACTCACAACCTACAGGTGTAAGACAAGCC
AGAAGAGGGCTATACGTAAGATAATGGGTGAGATAATAACCAAGCGGGCAGCCGAGATGACACTAGACGAACTCATAAAA
GCAATGCTCTTCGGCCAGTTAGCCAACGAGATATTCGAGGCAGCAAAGAAGATCTATCCGCTAAGAAAGGTCGAGATATA
CAAGTCAAAGCTACTCACGGTACCCGGACCAGACGGCAAACCACAGCCAGCAGTAGTAGTATCACCACTAATGTACGAAG
TCCGCTAG

Upstream 100 bases:

>100_bases
TGCTGGAGTTTCTCTACGCCCTCCTCAAAACACTTGAAGCTACTGCTAAGACTTTAAAGGAGCCGGGCCAGCAACACGGC
AGGCTCGGGGGTACCGGGTA

Downstream 100 bases:

>100_bases
CGCTCTGTCCAAACATTTTCCCATTACAAGCCTACTCCTAAATTCCTCAGCTATTCAATGCTGAGTTCTTTCCCTGGCAT
ACAATTCCCAGGCCTTAGCT

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSRRAVSIRDKWRLKKWYEVIAPPVFGNVVLGTTPADDPRKLIGRVMETTLYDITGDFSLVHVHLFFQIVDVDEENLKAY
TRFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRITGVVLTTYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIK
AMLFGQLANEIFEAAKKIYPLRKVEIYKSKLLTVPGPDGKPQPAVVVSPLMYEVR

Sequences:

>Translated_215_residues
MSRRAVSIRDKWRLKKWYEVIAPPVFGNVVLGTTPADDPRKLIGRVMETTLYDITGDFSLVHVHLFFQIVDVDEENLKAY
TRFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRITGVVLTTYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIK
AMLFGQLANEIFEAAKKIYPLRKVEIYKSKLLTVPGPDGKPQPAVVVSPLMYEVR
>Mature_214_residues
SRRAVSIRDKWRLKKWYEVIAPPVFGNVVLGTTPADDPRKLIGRVMETTLYDITGDFSLVHVHLFFQIVDVDEENLKAYT
RFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRITGVVLTTYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIKA
MLFGQLANEIFEAAKKIYPLRKVEIYKSKLLTVPGPDGKPQPAVVVSPLMYEVR

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family [H]

Homologues:

Organism=Homo sapiens, GI4506723, Length=204, Percent_Identity=32.843137254902, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17553700, Length=208, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6323577, Length=209, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6323474, Length=209, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17864162, Length=202, Percent_Identity=28.7128712871287, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24638499, Length=161, Percent_Identity=29.1925465838509, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001593
- InterPro:   IPR018281 [H]

Pfam domain/function: PF01015 Ribosomal_S3Ae [H]

EC number: NA

Molecular weight: Translated: 24650; Mature: 24519

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRAVSIRDKWRLKKWYEVIAPPVFGNVVLGTTPADDPRKLIGRVMETTLYDITGDFSL
CCCCEECHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
VHVHLFFQIVDVDEENLKAYTRFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRI
HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEE
TGVVLTTYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIKAMLFGQLANEIFEAAKKIYP
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRKVEIYKSKLLTVPGPDGKPQPAVVVSPLMYEVR
HHHHHHHHHHEEECCCCCCCCCCCEEECCHHHHCC
>Mature Secondary Structure 
SRRAVSIRDKWRLKKWYEVIAPPVFGNVVLGTTPADDPRKLIGRVMETTLYDITGDFSL
CCCEECHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
VHVHLFFQIVDVDEENLKAYTRFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRI
HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEE
TGVVLTTYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIKAMLFGQLANEIFEAAKKIYP
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRKVEIYKSKLLTVPGPDGKPQPAVVVSPLMYEVR
HHHHHHHHHHEEECCCCCCCCCCCEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA