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The map label for this gene is 124027304

Identifier: 124027304

GI number: 124027304

Start: 401897

End: 402718

Strand: Reverse

Name: 124027304

Synonym: Hbut_0413

Alternate gene names: NA

Gene position: 402718-401897 (Counterclockwise)

Preceding gene: 124027306

Following gene: 124027303

Centisome position: 24.16

GC content: 49.88

Gene sequence:

>822_bases
ATGCTGGTACTAGCCTCTACACGGACTATCCCGGCTATGCTGCCGGAAAGCATACGCATACTATACGAGGCTGGCTTTGA
CTCTGTAGATGTGAGCTATAACAACATAGAGAGGTTTGACATAGACTACCCTTCAGCATATAGCTACTTCCGTGCAGCCC
TCCAAGAGGCTAGTAGACTTGGAGTAAAACCCCTAACGCTACACGCGCCCTGGGAAGAATATTATCTCATAATGCTCGGT
AAGAACATAGAGTACGCGGTTGAGGAGGCAAGAATACTTCTAGACATGGCCTACAGCTACGGTGTCGATGTAGTTGTATT
TCACCCATTTTCAGCCCAGCGCGTTGGCGAGTCGAGGGTAGTATGGCTGAACAAGAAGTTCTTTGCATTACTGGCAGACT
ACTCGGAGCACGAGGGCCTCTCCATAGTTGCTATAGAGAATGCAGAGCGTAGAAAGCCGTGGAATAGCATAGCGGCAATA
ACTTCCCTAGCGAGGAGTGTTGGTAGTCAAAGGCTTTCAGTCTGCATTGATGTAGGTCATGCAAATATCAACGGCTACAC
TCCACAGAGGATAGGAGAGGAGCTGGAGGGCGTAGAGCCTATATGCATACACATCCACGATAACGATGGCAGAGAGGACA
AGCACGAACTGCCGGGAACCGGGACCATAGACTGGGAGGGCATAGCAAGTCTTGAGAGTATCGTAACTGCCCGCTATCAT
GTAGCGGAAGTGGACTGTAATGGGTCGCCGAGGCTCTGCGCTGTAAAGGCGAGGATAGCGACCACAGTAATATCCCAGCT
TTATCTTAAATACCAGGCGTAG

Upstream 100 bases:

>100_bases
TGGCAAACTCTTGGCTGCACCTCCTGGAGGGCCAGGTCTATGCTAACTGGTAGCACTATAATACTGGCGGCATCGACTTA
AAGAGCCCGGTGCCATGGAA

Downstream 100 bases:

>100_bases
AGGCTAACCAGAACGGGCTGTGGTCCTTGCGTCGCGATCAGGTTGTAGGTATTGGAATGCTCCTCGTAAGCCTGGGCGTC
ATAGTGTTCTATGCTATAGC

Product: AP endonuclease

Products: NA

Alternate protein names: Xylose Isomerase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLVLASTRTIPAMLPESIRILYEAGFDSVDVSYNNIERFDIDYPSAYSYFRAALQEASRLGVKPLTLHAPWEEYYLIMLG
KNIEYAVEEARILLDMAYSYGVDVVVFHPFSAQRVGESRVVWLNKKFFALLADYSEHEGLSIVAIENAERRKPWNSIAAI
TSLARSVGSQRLSVCIDVGHANINGYTPQRIGEELEGVEPICIHIHDNDGREDKHELPGTGTIDWEGIASLESIVTARYH
VAEVDCNGSPRLCAVKARIATTVISQLYLKYQA

Sequences:

>Translated_273_residues
MLVLASTRTIPAMLPESIRILYEAGFDSVDVSYNNIERFDIDYPSAYSYFRAALQEASRLGVKPLTLHAPWEEYYLIMLG
KNIEYAVEEARILLDMAYSYGVDVVVFHPFSAQRVGESRVVWLNKKFFALLADYSEHEGLSIVAIENAERRKPWNSIAAI
TSLARSVGSQRLSVCIDVGHANINGYTPQRIGEELEGVEPICIHIHDNDGREDKHELPGTGTIDWEGIASLESIVTARYH
VAEVDCNGSPRLCAVKARIATTVISQLYLKYQA
>Mature_273_residues
MLVLASTRTIPAMLPESIRILYEAGFDSVDVSYNNIERFDIDYPSAYSYFRAALQEASRLGVKPLTLHAPWEEYYLIMLG
KNIEYAVEEARILLDMAYSYGVDVVVFHPFSAQRVGESRVVWLNKKFFALLADYSEHEGLSIVAIENAERRKPWNSIAAI
TSLARSVGSQRLSVCIDVGHANINGYTPQRIGEELEGVEPICIHIHDNDGREDKHELPGTGTIDWEGIASLESIVTARYH
VAEVDCNGSPRLCAVKARIATTVISQLYLKYQA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30571; Mature: 30571

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLASTRTIPAMLPESIRILYEAGFDSVDVSYNNIERFDIDYPSAYSYFRAALQEASRL
CEEEECCCCCHHHCHHHHHHHHHCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHC
GVKPLTLHAPWEEYYLIMLGKNIEYAVEEARILLDMAYSYGVDVVVFHPFSAQRVGESRV
CCCEEEEECCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCEE
VWLNKKFFALLADYSEHEGLSIVAIENAERRKPWNSIAAITSLARSVGSQRLSVCIDVGH
EEECHHHEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC
ANINGYTPQRIGEELEGVEPICIHIHDNDGREDKHELPGTGTIDWEGIASLESIVTARYH
CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHEE
VAEVDCNGSPRLCAVKARIATTVISQLYLKYQA
EEEECCCCCCCEEEEHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MLVLASTRTIPAMLPESIRILYEAGFDSVDVSYNNIERFDIDYPSAYSYFRAALQEASRL
CEEEECCCCCHHHCHHHHHHHHHCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHC
GVKPLTLHAPWEEYYLIMLGKNIEYAVEEARILLDMAYSYGVDVVVFHPFSAQRVGESRV
CCCEEEEECCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCEE
VWLNKKFFALLADYSEHEGLSIVAIENAERRKPWNSIAAITSLARSVGSQRLSVCIDVGH
EEECHHHEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC
ANINGYTPQRIGEELEGVEPICIHIHDNDGREDKHELPGTGTIDWEGIASLESIVTARYH
CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHEE
VAEVDCNGSPRLCAVKARIATTVISQLYLKYQA
EEEECCCCCCCEEEEHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA