Click here to switch to the map view.

The map label for this gene is for [H]

Identifier: 124027248

GI number: 124027248

Start: 339808

End: 341643

Strand: Direct

Name: for [H]

Synonym: Hbut_0351

Alternate gene names: 124027248

Gene position: 339808-341643 (Clockwise)

Preceding gene: 124027245

Following gene: 124027250

Centisome position: 20.38

GC content: 57.03

Gene sequence:

>1836_bases
ATGGCTAGCGAGAAGCTCTTCTCCTGGTTCAAGCGCATCTTGTGGGTTGACCTCTCAAGGGGCGAGTTTCGGGAGTGGCG
CTATCCCGGCGAGATGGCTAGGATGTTTGTTGGAGGTAGGGGCTATGCGATCAAGATACTCTGGGACCACTTGCCGGAAG
GTGCTGACCCCCTGGGTCCCGACAATTTGCTAATACTCGCTGTCGGACCTCTCACCGGGCTTCCTGGCCCCTCTACCGGG
AAGATGGTCGTGGCTGCTAAAAGCCCGCTAACGGGCGGCTACGGCGACGGCAATATAGGTACCAGGGCTGCTGTCAACCT
ACGAGCCGCCGGCTGGGACGCAGTGGTCATTCGGGGCGTGGCCAGGAAGCCCTCTATACTCGTGATAGAGGATGATAAGG
CCTGGCTAGAGCCCGCCGACGACCTATGGGGCCTCGATACGTTCCGGGCTGCTGACAAGCTCGAGGAGAGGTTTGGCAAG
ACCGCAGGCATACTGTTGATAGGGCCTGGCGGCGAGAACATGGTACGCTATGCAACCATCGTATCGCAGAAGGGCCGCTC
CGGCGGTAGACCAGGCATGGGCGCTGTTATGGGCTCCAAGAAGCTGAAGGCGATAGTTGTAAGGGGCACGAAAAAGCCAG
AGTTATTCCATCCGGAGGAGGAGCTAAGGATAGGCACAGAGGCCATTAAATTTGTCAAGAGTAGCCCGAACTACGAGTTC
TGGATGAGGCAGGGCACGATGATGACAATCGAGTGGTCGCAGAATGCCAGCGTACTGCCAACCTACAACTTCCGCGAGGG
CGTCTTCGACGGATGGGAGGGGATAAGCGGTAACTACATGGAGAAAGTAAAGGTTACCACGAAGAGCTGCCCACTATGCC
CGATGAGCTGTGGCCATGTGGTAAAGGATGCTGAGGGCCAGCCCTCCGAGCTAGACTACGAGAATGTGGCAATGCTCGGC
AGTAACATAGGAATATCCAGGCTCGAGGATGCTGCGCTGCTTAACAGGCTAGCAGACATGTACGGCATTGATACGATTAG
CCTGGGGAACACTCTCGGCTACGCACTTGAGGCGGCGGAGAGAGGTAAGCTAGAACTAGACGCCACTTGGGGCGAAACGA
GGAAGCTCGCAAAGCTTGTAGAGGACATAGCCTATCGCCGCGGCGTCGGCGACCTCCTCGCAGAGGGTGTGAAGCGAGTC
TCCGAGAAGGTTGGCGAGACCTGGTATGCTATGCATGTCAAGGGCCTAGAAGTGAGCGCTTATGATTGTCACGCAGCCCC
GGGCATGGCACTGAGCTATGCTACGAGCCCGATTGGGGCACACCATAAGGATGCCTGGGTCATATCGTGGGAGGTGCAGC
ACGGCAGGTTCAAGTATGGCAGGGAGAAGGTGCTAAGGGTTATCGAGCTGCAGAGAATACGCGGTGGCTTCTTCGAGACA
GCAGTAACCTGCAGATTTCCCTTCGTAGAGCTGGGCCTCGCACTAGACTACTACGTGAAAATGTTCCAGGCCGCAACAGG
GCTCAGCTACAGTCTCGAAGACCACTTCACCGTCGCCGACCGGATCTACACGCTGATAAGGCTGTTCTGGGTGCGCGAGC
ACGGTGGCTGGGGCATAGAGATGGACCTGCCGCCGGAGAGGTGGTTCCGCGAGCCCCTGACCAAGGGCCCGCTTAAGGGC
GCCAAGCTAGACAAGGACAAGTTCATCGAGATGCTGAAGATATACTACAGGGAGAGGGGCTGGGCTGAGAACGGTGTACC
ATTGCCGGAGACGGTGAAAAAACTCGGTCTAGGCGAGGATGCTGTAAGGCTAGCAGAAAGATACTCATCAAAATAA

Upstream 100 bases:

>100_bases
ACCCTTCTACCCTCATTTATGCAGTTGAGTACTGTTTATACGATTTGGATTTTTACTAGTAGTATCCCCTAAACTGTTCC
TGGAAGAGGTGCTTCCCGTT

Downstream 100 bases:

>100_bases
CCCATAGCCAAGGGAGCGAGCCCGATGAGGGTTCCCGGCCGCGTTTTTTCCCAGCTCATCCTCGCCCATCTATGGTTGCT
CCGGGTAATGGTAGAATGTC

Product: formaldehyde:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MASEKLFSWFKRILWVDLSRGEFREWRYPGEMARMFVGGRGYAIKILWDHLPEGADPLGPDNLLILAVGPLTGLPGPSTG
KMVVAAKSPLTGGYGDGNIGTRAAVNLRAAGWDAVVIRGVARKPSILVIEDDKAWLEPADDLWGLDTFRAADKLEERFGK
TAGILLIGPGGENMVRYATIVSQKGRSGGRPGMGAVMGSKKLKAIVVRGTKKPELFHPEEELRIGTEAIKFVKSSPNYEF
WMRQGTMMTIEWSQNASVLPTYNFREGVFDGWEGISGNYMEKVKVTTKSCPLCPMSCGHVVKDAEGQPSELDYENVAMLG
SNIGISRLEDAALLNRLADMYGIDTISLGNTLGYALEAAERGKLELDATWGETRKLAKLVEDIAYRRGVGDLLAEGVKRV
SEKVGETWYAMHVKGLEVSAYDCHAAPGMALSYATSPIGAHHKDAWVISWEVQHGRFKYGREKVLRVIELQRIRGGFFET
AVTCRFPFVELGLALDYYVKMFQAATGLSYSLEDHFTVADRIYTLIRLFWVREHGGWGIEMDLPPERWFREPLTKGPLKG
AKLDKDKFIEMLKIYYRERGWAENGVPLPETVKKLGLGEDAVRLAERYSSK

Sequences:

>Translated_611_residues
MASEKLFSWFKRILWVDLSRGEFREWRYPGEMARMFVGGRGYAIKILWDHLPEGADPLGPDNLLILAVGPLTGLPGPSTG
KMVVAAKSPLTGGYGDGNIGTRAAVNLRAAGWDAVVIRGVARKPSILVIEDDKAWLEPADDLWGLDTFRAADKLEERFGK
TAGILLIGPGGENMVRYATIVSQKGRSGGRPGMGAVMGSKKLKAIVVRGTKKPELFHPEEELRIGTEAIKFVKSSPNYEF
WMRQGTMMTIEWSQNASVLPTYNFREGVFDGWEGISGNYMEKVKVTTKSCPLCPMSCGHVVKDAEGQPSELDYENVAMLG
SNIGISRLEDAALLNRLADMYGIDTISLGNTLGYALEAAERGKLELDATWGETRKLAKLVEDIAYRRGVGDLLAEGVKRV
SEKVGETWYAMHVKGLEVSAYDCHAAPGMALSYATSPIGAHHKDAWVISWEVQHGRFKYGREKVLRVIELQRIRGGFFET
AVTCRFPFVELGLALDYYVKMFQAATGLSYSLEDHFTVADRIYTLIRLFWVREHGGWGIEMDLPPERWFREPLTKGPLKG
AKLDKDKFIEMLKIYYRERGWAENGVPLPETVKKLGLGEDAVRLAERYSSK
>Mature_610_residues
ASEKLFSWFKRILWVDLSRGEFREWRYPGEMARMFVGGRGYAIKILWDHLPEGADPLGPDNLLILAVGPLTGLPGPSTGK
MVVAAKSPLTGGYGDGNIGTRAAVNLRAAGWDAVVIRGVARKPSILVIEDDKAWLEPADDLWGLDTFRAADKLEERFGKT
AGILLIGPGGENMVRYATIVSQKGRSGGRPGMGAVMGSKKLKAIVVRGTKKPELFHPEEELRIGTEAIKFVKSSPNYEFW
MRQGTMMTIEWSQNASVLPTYNFREGVFDGWEGISGNYMEKVKVTTKSCPLCPMSCGHVVKDAEGQPSELDYENVAMLGS
NIGISRLEDAALLNRLADMYGIDTISLGNTLGYALEAAERGKLELDATWGETRKLAKLVEDIAYRRGVGDLLAEGVKRVS
EKVGETWYAMHVKGLEVSAYDCHAAPGMALSYATSPIGAHHKDAWVISWEVQHGRFKYGREKVLRVIELQRIRGGFFETA
VTCRFPFVELGLALDYYVKMFQAATGLSYSLEDHFTVADRIYTLIRLFWVREHGGWGIEMDLPPERWFREPLTKGPLKGA
KLDKDKFIEMLKIYYRERGWAENGVPLPETVKKLGLGEDAVRLAERYSSK

Specific function: Catalyzes the oxidation of C1-C3 aldehydes. Involved in peptides fermentation [H]

COG id: COG2414

COG function: function code C; Aldehyde:ferredoxin oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AOR/FOR family [H]

Homologues:

Organism=Escherichia coli, GI1787962, Length=321, Percent_Identity=32.398753894081, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013985
- InterPro:   IPR013983
- InterPro:   IPR001203 [H]

Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]

EC number: =1.2.7.5 [H]

Molecular weight: Translated: 68019; Mature: 67888

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEKLFSWFKRILWVDLSRGEFREWRYPGEMARMFVGGRGYAIKILWDHLPEGADPLGP
CCCHHHHHHHHHHHEEECCCCCCHHCCCCHHHHHHEECCCCEEEEEEEHHCCCCCCCCCC
DNLLILAVGPLTGLPGPSTGKMVVAAKSPLTGGYGDGNIGTRAAVNLRAAGWDAVVIRGV
CCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEC
ARKPSILVIEDDKAWLEPADDLWGLDTFRAADKLEERFGKTAGILLIGPGGENMVRYATI
CCCCCEEEEECCCHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
VSQKGRSGGRPGMGAVMGSKKLKAIVVRGTKKPELFHPEEELRIGTEAIKFVKSSPNYEF
HHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
WMRQGTMMTIEWSQNASVLPTYNFREGVFDGWEGISGNYMEKVKVTTKSCPLCPMSCGHV
EEECCEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCH
VKDAEGQPSELDYENVAMLGSNIGISRLEDAALLNRLADMYGIDTISLGNTLGYALEAAE
HCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHC
RGKLELDATWGETRKLAKLVEDIAYRRGVGDLLAEGVKRVSEKVGETWYAMHVKGLEVSA
CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEE
YDCHAAPGMALSYATSPIGAHHKDAWVISWEVQHGRFKYGREKVLRVIELQRIRGGFFET
EECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
AVTCRFPFVELGLALDYYVKMFQAATGLSYSLEDHFTVADRIYTLIRLFWVREHGGWGIE
EEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHEEECCCEEEE
MDLPPERWFREPLTKGPLKGAKLDKDKFIEMLKIYYRERGWAENGVPLPETVKKLGLGED
ECCCHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH
AVRLAERYSSK
HHHHHHHHCCC
>Mature Secondary Structure 
ASEKLFSWFKRILWVDLSRGEFREWRYPGEMARMFVGGRGYAIKILWDHLPEGADPLGP
CCHHHHHHHHHHHEEECCCCCCHHCCCCHHHHHHEECCCCEEEEEEEHHCCCCCCCCCC
DNLLILAVGPLTGLPGPSTGKMVVAAKSPLTGGYGDGNIGTRAAVNLRAAGWDAVVIRGV
CCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEC
ARKPSILVIEDDKAWLEPADDLWGLDTFRAADKLEERFGKTAGILLIGPGGENMVRYATI
CCCCCEEEEECCCHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
VSQKGRSGGRPGMGAVMGSKKLKAIVVRGTKKPELFHPEEELRIGTEAIKFVKSSPNYEF
HHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
WMRQGTMMTIEWSQNASVLPTYNFREGVFDGWEGISGNYMEKVKVTTKSCPLCPMSCGHV
EEECCEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCH
VKDAEGQPSELDYENVAMLGSNIGISRLEDAALLNRLADMYGIDTISLGNTLGYALEAAE
HCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHC
RGKLELDATWGETRKLAKLVEDIAYRRGVGDLLAEGVKRVSEKVGETWYAMHVKGLEVSA
CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEE
YDCHAAPGMALSYATSPIGAHHKDAWVISWEVQHGRFKYGREKVLRVIELQRIRGGFFET
EECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
AVTCRFPFVELGLALDYYVKMFQAATGLSYSLEDHFTVADRIYTLIRLFWVREHGGWGIE
EEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHEEECCCEEEE
MDLPPERWFREPLTKGPLKGAKLDKDKFIEMLKIYYRERGWAENGVPLPETVKKLGLGED
ECCCHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH
AVRLAERYSSK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7642512 [H]