| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027112
Identifier: 124027112
GI number: 124027112
Start: 197033
End: 198154
Strand: Direct
Name: 124027112
Synonym: Hbut_0215
Alternate gene names: NA
Gene position: 197033-198154 (Clockwise)
Preceding gene: 124027105
Following gene: 124027117
Centisome position: 11.82
GC content: 60.43
Gene sequence:
>1122_bases GTGCTAGAGGCCTGGGTTGGAGGGTTTGGGACCGGGTTGCTCTGGTTCGTGTTTACGACGGGACTGTGTAACCTGCGGTG CCGCTACTGTGGTGGCGGGTTTCCGCCGGATATCGTGCCGCCGTGGCCGCGGTACCGTGTTGAGGAGCTTGTAGAGCTTA TCGAGCGTGTTGATTCTAGGCCGGTCGTGTTCTTTTATGGTGGTGAGCCGCTGCTGAATCCGGGCTTTATCAGAGAGGTT ATGGATGCTCTGCCCCATGCTGTGTTCGGGATACAGACCAATGCTATTCTTCACAATAGGCTTGGCGATGAGTACTGGGC CCGGTTTACCACTGTCCTCCTCAGTGTTGATGGTGTGGAGGGTGTTACGGATCGGTGGCGCGGCCCTGGTGTCTATTCGA GGGTTGTCTCTGCGCTTCGCCGGCTCCAGAGGCTGCGGGAGAGGCTGGGTGGTCCCGCAACAATTGTCGCGAGGATGGCT GTGCACCGTGAGATAAGCATTTACCGTGACGTTATGCATCTCCTCCGGGGCCTTGGCTTCGACAAGGTTCACTGGCAGCT CGACGCGGTGTGGAGTCCCCCGTGGCGGCTCGGTGCGTGGGCCCGGGAGAGCTACCTGCCGGGGCTCCGTAGGCTCGCCC GCTGGGTTGCGGCGCGTCCCCGGGCCCGGCTCCACAGAATAGTACCCTTTCACGGTATCGTATCAGCACTGTACAATGGG GGCTTCCGCTGGTACCCCTGTGGTGCTGGACGTACAGCTGTGGCTGTGCTAACTGACGGGAGGATTGTTGCCTGCCCTAT AGCGGTGAGGGAGGAATGGGCTGTGCTGGGTACTCTGGATACGTGGAGGGGCAGGGTGTTGCCTGAGAGCTTTGTGCCGG AGAGGTGCCGGTTGTGCAGCTACTATCCTCTCTGCGGGGGGCGCTGCCTCTACGCCCAGGTTGAGTCAAGCTATTGGCCG GGGAGGCTGCTAGAGGAGCTTGACTGGGTTACGAGGAGGACAATAGACATAGTTTTGGAGGAGGTTGTCCCGGCGGTTGA GAAAGCCGTGGAGAGGGGCGAGATCGACCTGGCTTACCTCTCCTACACCCCGGAGCTAGAGTCCACCGAGGTTATACCCT AG
Upstream 100 bases:
>100_bases TGTGCTCGAATAGTGTATGAATGTTTGGGCTGTTTTTAAACGTTAGCTCGGCTGGTGCGTAGTGGCTAAGTGGTGACTAG GTAGCATCTGGGTTTCGGTC
Downstream 100 bases:
>100_bases GGGGCTTCGGGCTTCTGCCCCTTCAACCTAAGCCTGTACCCCCTCTCCGCCAGCTCGTTGAGCAATGCCTCGGCCTCAGC TGGCCCCGGAACCTCCAGTG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Fe-S Oxidoreductase
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MLEAWVGGFGTGLLWFVFTTGLCNLRCRYCGGGFPPDIVPPWPRYRVEELVELIERVDSRPVVFFYGGEPLLNPGFIREV MDALPHAVFGIQTNAILHNRLGDEYWARFTTVLLSVDGVEGVTDRWRGPGVYSRVVSALRRLQRLRERLGGPATIVARMA VHREISIYRDVMHLLRGLGFDKVHWQLDAVWSPPWRLGAWARESYLPGLRRLARWVAARPRARLHRIVPFHGIVSALYNG GFRWYPCGAGRTAVAVLTDGRIVACPIAVREEWAVLGTLDTWRGRVLPESFVPERCRLCSYYPLCGGRCLYAQVESSYWP GRLLEELDWVTRRTIDIVLEEVVPAVEKAVERGEIDLAYLSYTPELESTEVIP
Sequences:
>Translated_373_residues MLEAWVGGFGTGLLWFVFTTGLCNLRCRYCGGGFPPDIVPPWPRYRVEELVELIERVDSRPVVFFYGGEPLLNPGFIREV MDALPHAVFGIQTNAILHNRLGDEYWARFTTVLLSVDGVEGVTDRWRGPGVYSRVVSALRRLQRLRERLGGPATIVARMA VHREISIYRDVMHLLRGLGFDKVHWQLDAVWSPPWRLGAWARESYLPGLRRLARWVAARPRARLHRIVPFHGIVSALYNG GFRWYPCGAGRTAVAVLTDGRIVACPIAVREEWAVLGTLDTWRGRVLPESFVPERCRLCSYYPLCGGRCLYAQVESSYWP GRLLEELDWVTRRTIDIVLEEVVPAVEKAVERGEIDLAYLSYTPELESTEVIP >Mature_373_residues MLEAWVGGFGTGLLWFVFTTGLCNLRCRYCGGGFPPDIVPPWPRYRVEELVELIERVDSRPVVFFYGGEPLLNPGFIREV MDALPHAVFGIQTNAILHNRLGDEYWARFTTVLLSVDGVEGVTDRWRGPGVYSRVVSALRRLQRLRERLGGPATIVARMA VHREISIYRDVMHLLRGLGFDKVHWQLDAVWSPPWRLGAWARESYLPGLRRLARWVAARPRARLHRIVPFHGIVSALYNG GFRWYPCGAGRTAVAVLTDGRIVACPIAVREEWAVLGTLDTWRGRVLPESFVPERCRLCSYYPLCGGRCLYAQVESSYWP GRLLEELDWVTRRTIDIVLEEVVPAVEKAVERGEIDLAYLSYTPELESTEVIP
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42448; Mature: 42448
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAWVGGFGTGLLWFVFTTGLCNLRCRYCGGGFPPDIVPPWPRYRVEELVELIERVDSR CCCCHHCCHHHHHHHHHHHHCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PVVFFYGGEPLLNPGFIREVMDALPHAVFGIQTNAILHNRLGDEYWARFTTVLLSVDGVE CEEEEECCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCC GVTDRWRGPGVYSRVVSALRRLQRLRERLGGPATIVARMAVHREISIYRDVMHLLRGLGF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DKVHWQLDAVWSPPWRLGAWARESYLPGLRRLARWVAARPRARLHRIVPFHGIVSALYNG CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCC GFRWYPCGAGRTAVAVLTDGRIVACPIAVREEWAVLGTLDTWRGRVLPESFVPERCRLCS CCEEEECCCCCEEEEEEECCEEEEEEHHHCCCHHEEECCHHHCCCCCCHHHCHHHHHHCC YYPLCGGRCLYAQVESSYWPGRLLEELDWVTRRTIDIVLEEVVPAVEKAVERGEIDLAYL CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE SYTPELESTEVIP EECCCCCCCCCCC >Mature Secondary Structure MLEAWVGGFGTGLLWFVFTTGLCNLRCRYCGGGFPPDIVPPWPRYRVEELVELIERVDSR CCCCHHCCHHHHHHHHHHHHCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PVVFFYGGEPLLNPGFIREVMDALPHAVFGIQTNAILHNRLGDEYWARFTTVLLSVDGVE CEEEEECCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCC GVTDRWRGPGVYSRVVSALRRLQRLRERLGGPATIVARMAVHREISIYRDVMHLLRGLGF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DKVHWQLDAVWSPPWRLGAWARESYLPGLRRLARWVAARPRARLHRIVPFHGIVSALYNG CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCC GFRWYPCGAGRTAVAVLTDGRIVACPIAVREEWAVLGTLDTWRGRVLPESFVPERCRLCS CCEEEECCCCCEEEEEEECCEEEEEEHHHCCCHHEEECCHHHCCCCCCHHHCHHHHHHCC YYPLCGGRCLYAQVESSYWPGRLLEELDWVTRRTIDIVLEEVVPAVEKAVERGEIDLAYL CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE SYTPELESTEVIP EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA