Click here to switch to the map view.

The map label for this gene is 124027104

Identifier: 124027104

GI number: 124027104

Start: 189294

End: 190082

Strand: Direct

Name: 124027104

Synonym: Hbut_0207

Alternate gene names: NA

Gene position: 189294-190082 (Clockwise)

Preceding gene: 124027102

Following gene: 124027105

Centisome position: 11.35

GC content: 56.91

Gene sequence:

>789_bases
ATGGCTACTGAGCCTCTGTTAGTGCTTGCAGCCTACCGGGGCAGCACACGGTACAACCTTATACGGGGGCTGCTCGCAAA
GGCTGAGGCAGCCTGTAGCATGGATGGCTACGTTGAATGCCGCATCGGAGAGCAGGGCGAGTCGATTCCCCGCCCCGTGC
TCGCAGCCCGCATATACCAGTGCAGCTGCTGGGATGACGGGGCAGAGATATGGGCGAGGGTTAGCGGTGAGCCCCCCGCA
CTGGAGGCGCTGAAGAGGGTTCTCCGGCAGGAGAAGGGGCTAGGCTTCCAGGTCCTCTCAGAGACGAAGTATAGTATTAT
GCTGCGGCTAGTGAGCGAGATGGAGCAGTCCTGCGGCCTCGTAGACTGGTGTCCCTTTACTAAGCCAATTAAGGCAGCGA
TGGTGCGCACGGTTATCTGTACGAGTAGAATGGTGCTGGTCGAGCTGATAGTTGCTAAGGCGTCAGTACTTCACAGCATA
GAGGAGGCTGGCTTCGAGATAATATACCGGGCTCCCCTCAACAGCGTCGAGCACAGCCTCACGGCTAAGCAGGAGGCAGC
ACTAGTGCTAGCATACCTCTACGGCTACTACAGCTATCCACGCCGCATAAGCGTGAAAGGGCTAGCATCAAAGCTCGGTA
TTAGTAGTTCAGCGCTCGCAGAGCTTCTGAGAAGGGCAGAACTCAAAATAATAACACGCTACATTCTCGAGGAGCTCCCA
CACTACCTACTACGCCACTATGCAGCTGCAAGAATGGCTGAGGAGCGCCGTAGGGCTAGCCGACGGTGA

Upstream 100 bases:

>100_bases
GCTCCTTGTCATACTTATCTTACAGGCTTCAACCAGGGGCCTCCCACGGGCACCTAGATATGTAGGTGGCGGATCTCCCT
GTTCCCGGGGCTGTACGGAG

Downstream 100 bases:

>100_bases
GTTCTGGTAGGTGTACCGGTGGATGCACGGGTACACATCACTGTTTGCGTTTTACGGGCTTATTTAAGGTTTCCCTCATT
CTAGCTCTAGGCAAAAGTTT

Product: HTHelix DNA binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MATEPLLVLAAYRGSTRYNLIRGLLAKAEAACSMDGYVECRIGEQGESIPRPVLAARIYQCSCWDDGAEIWARVSGEPPA
LEALKRVLRQEKGLGFQVLSETKYSIMLRLVSEMEQSCGLVDWCPFTKPIKAAMVRTVICTSRMVLVELIVAKASVLHSI
EEAGFEIIYRAPLNSVEHSLTAKQEAALVLAYLYGYYSYPRRISVKGLASKLGISSSALAELLRRAELKIITRYILEELP
HYLLRHYAAARMAEERRRASRR

Sequences:

>Translated_262_residues
MATEPLLVLAAYRGSTRYNLIRGLLAKAEAACSMDGYVECRIGEQGESIPRPVLAARIYQCSCWDDGAEIWARVSGEPPA
LEALKRVLRQEKGLGFQVLSETKYSIMLRLVSEMEQSCGLVDWCPFTKPIKAAMVRTVICTSRMVLVELIVAKASVLHSI
EEAGFEIIYRAPLNSVEHSLTAKQEAALVLAYLYGYYSYPRRISVKGLASKLGISSSALAELLRRAELKIITRYILEELP
HYLLRHYAAARMAEERRRASRR
>Mature_261_residues
ATEPLLVLAAYRGSTRYNLIRGLLAKAEAACSMDGYVECRIGEQGESIPRPVLAARIYQCSCWDDGAEIWARVSGEPPAL
EALKRVLRQEKGLGFQVLSETKYSIMLRLVSEMEQSCGLVDWCPFTKPIKAAMVRTVICTSRMVLVELIVAKASVLHSIE
EAGFEIIYRAPLNSVEHSLTAKQEAALVLAYLYGYYSYPRRISVKGLASKLGISSSALAELLRRAELKIITRYILEELPH
YLLRHYAAARMAEERRRASRR

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29388; Mature: 29257

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEPLLVLAAYRGSTRYNLIRGLLAKAEAACSMDGYVECRIGEQGESIPRPVLAARIYQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
CSCWDDGAEIWARVSGEPPALEALKRVLRQEKGLGFQVLSETKYSIMLRLVSEMEQSCGL
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VDWCPFTKPIKAAMVRTVICTSRMVLVELIVAKASVLHSIEEAGFEIIYRAPLNSVEHSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
TAKQEAALVLAYLYGYYSYPRRISVKGLASKLGISSSALAELLRRAELKIITRYILEELP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HYLLRHYAAARMAEERRRASRR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATEPLLVLAAYRGSTRYNLIRGLLAKAEAACSMDGYVECRIGEQGESIPRPVLAARIYQ
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
CSCWDDGAEIWARVSGEPPALEALKRVLRQEKGLGFQVLSETKYSIMLRLVSEMEQSCGL
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VDWCPFTKPIKAAMVRTVICTSRMVLVELIVAKASVLHSIEEAGFEIIYRAPLNSVEHSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
TAKQEAALVLAYLYGYYSYPRRISVKGLASKLGISSSALAELLRRAELKIITRYILEELP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HYLLRHYAAARMAEERRRASRR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA