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The map label for this gene is 124027031

Identifier: 124027031

GI number: 124027031

Start: 115453

End: 116640

Strand: Reverse

Name: 124027031

Synonym: Hbut_0131

Alternate gene names: NA

Gene position: 116640-115453 (Counterclockwise)

Preceding gene: 124027033

Following gene: 124027030

Centisome position: 7.0

GC content: 57.07

Gene sequence:

>1188_bases
ATGGGGTGCGTAGAGCTAGCTCCTGGCGAGGGGCTTTGGGTCTCGGGACCTGCCCGCGTCGAGGTTTCCTCGGGGGAGCT
GCTAGCCAGCGGCTATACGATAGCTGCTGGCGGGGAAGCATTGGTTAGGGGTGTGAGGGGGTTCACCTTCTATGCAACAA
CGGCCTCGAGGGTATGCGTCTCGTTGGGCGCTGGAGCTTCGATGAATCGTGTCAGTGAGGGTTATGATGTCGCGCTCAGC
TGGCTCAAGCTGGGTGAGGAGCTGGCTCGTAGTGGTGTGCATCGTGTGCTTGTGGTTGGGCCGGTTGAGTCAGGCAAATC
CACCCTTACAGCATGGCTGAGAAACATCCTTGGGGCATGCGTTGTCGAGGCTGATGTTGGCCAGAACGAGTTGGGCACCC
CGGCGATGGTCTCCTATGCGCCCTTCGATGGGGCTAAGCTAGTGTTAGAGGACGCTGGCGCTGTTGGAGGATTCTTTGTG
GGCCACGTATCGGCTGAGAGGGCTGCAGAGCTGGTAGTTGCGGCTACAGCACGCGCTGCCATGCGCTGTGGTGGACAAAG
GATAGTGGTGGACACGGATGGCTATGTCCAGGGGAGGGGAGTTGTGTACAAGGCAGCGCTGGCCGAGACACTCAATGTTG
ACGTAGTGATATCGCTTGACCAGGGTCTGGCTAAGGCGTTGAGAGCAAGAGGCCTCGAAGTTGTTGAGGCTCCACAGCCA
CGACTTCGTAGGGAGAGGAGCAGGCACGACCGGAGGGTTTTCAGACAGAGGCTCTATACGAGGCTCTTTGCGGAAGCGAG
AACCCTTGTCCTCCGTGATGTGGACATAGTGAACCTCTGCAATTACAGTGTTGAAGGCGATAATGTAATCTATGACTGTG
CGGGTAAACTTATCGTCGAGTCTCGGAGAAAGCCGCAACAAGGGTTCTGGCTAAGGCCAGGCTGGGCTCGGGGGCTGCTT
GCCGGCCTCCATACAAGGGATGGTGATGTACTGGCCTTTGTAGAGTCGTTCAACCCTGTAGAGCCGAGGCTTGTTGTAAA
GGTGGGGCGAGACATTGAGCCTAATGCTGTGCATGGCGTTACACTGGGCTGGGTTAGGCTTGGCGATAACTATGTGGAGC
AGGAACATCTGCCGGTAGACGTATACCCTCTAGCAGTGCTCCGCTCAAAACAAGTTAGGAGGCGTTAA

Upstream 100 bases:

>100_bases
CGGTCCATCAAGCCCCCGAGGCCCCCAGTTACGGGTTGTGGCTGCAGTATTTAGGGGTGGCCTTACCGGCTGCCTCTTCC
TGTCGGGGCTGTGGCCTGGG

Downstream 100 bases:

>100_bases
CGTCTCCCTCCAGTCATCTCTCCGCCAGCACTTACGACTGGCACGACTGGCAGGCTAGCATGTAGCTGGGCGTCAGCGTA
TAGGGATACTCTTGGTGCTG

Product: GTPase or GTP-binding - cren protein

Products: NA

Alternate protein names: Polynucleotide kinase PH0197 [H]

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MGCVELAPGEGLWVSGPARVEVSSGELLASGYTIAAGGEALVRGVRGFTFYATTASRVCVSLGAGASMNRVSEGYDVALS
WLKLGEELARSGVHRVLVVGPVESGKSTLTAWLRNILGACVVEADVGQNELGTPAMVSYAPFDGAKLVLEDAGAVGGFFV
GHVSAERAAELVVAATARAAMRCGGQRIVVDTDGYVQGRGVVYKAALAETLNVDVVISLDQGLAKALRARGLEVVEAPQP
RLRRERSRHDRRVFRQRLYTRLFAEARTLVLRDVDIVNLCNYSVEGDNVIYDCAGKLIVESRRKPQQGFWLRPGWARGLL
AGLHTRDGDVLAFVESFNPVEPRLVVKVGRDIEPNAVHGVTLGWVRLGDNYVEQEHLPVDVYPLAVLRSKQVRRR

Sequences:

>Translated_395_residues
MGCVELAPGEGLWVSGPARVEVSSGELLASGYTIAAGGEALVRGVRGFTFYATTASRVCVSLGAGASMNRVSEGYDVALS
WLKLGEELARSGVHRVLVVGPVESGKSTLTAWLRNILGACVVEADVGQNELGTPAMVSYAPFDGAKLVLEDAGAVGGFFV
GHVSAERAAELVVAATARAAMRCGGQRIVVDTDGYVQGRGVVYKAALAETLNVDVVISLDQGLAKALRARGLEVVEAPQP
RLRRERSRHDRRVFRQRLYTRLFAEARTLVLRDVDIVNLCNYSVEGDNVIYDCAGKLIVESRRKPQQGFWLRPGWARGLL
AGLHTRDGDVLAFVESFNPVEPRLVVKVGRDIEPNAVHGVTLGWVRLGDNYVEQEHLPVDVYPLAVLRSKQVRRR
>Mature_394_residues
GCVELAPGEGLWVSGPARVEVSSGELLASGYTIAAGGEALVRGVRGFTFYATTASRVCVSLGAGASMNRVSEGYDVALSW
LKLGEELARSGVHRVLVVGPVESGKSTLTAWLRNILGACVVEADVGQNELGTPAMVSYAPFDGAKLVLEDAGAVGGFFVG
HVSAERAAELVVAATARAAMRCGGQRIVVDTDGYVQGRGVVYKAALAETLNVDVVISLDQGLAKALRARGLEVVEAPQPR
LRRERSRHDRRVFRQRLYTRLFAEARTLVLRDVDIVNLCNYSVEGDNVIYDCAGKLIVESRRKPQQGFWLRPGWARGLLA
GLHTRDGDVLAFVESFNPVEPRLVVKVGRDIEPNAVHGVTLGWVRLGDNYVEQEHLPVDVYPLAVLRSKQVRRR

Specific function: Polynucleotide kinase that can phosphorylate the 5'- hydroxyl groups of both single-stranded RNA (ssRNA) and single- stranded DNA (ssDNA). Exhibits a strong preference for ssRNA [H]

COG id: COG1341

COG function: function code R; Predicted GTPase or GTP-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: =2.7.1.78 [H]

Molecular weight: Translated: 42701; Mature: 42569

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCVELAPGEGLWVSGPARVEVSSGELLASGYTIAAGGEALVRGVRGFTFYATTASRVCV
CCCCEECCCCCEEECCCCEEEECCCCEEECCEEEEECCHHHHHHHCCEEEEEEHHHHHHH
SLGAGASMNRVSEGYDVALSWLKLGEELARSGVHRVLVVGPVESGKSTLTAWLRNILGAC
HHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHE
VVEADVGQNELGTPAMVSYAPFDGAKLVLEDAGAVGGFFVGHVSAERAAELVVAATARAA
EEECCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH
MRCGGQRIVVDTDGYVQGRGVVYKAALAETLNVDVVISLDQGLAKALRARGLEVVEAPQP
HHCCCCEEEEECCCEEECCCEEEEEHHHHHCCEEEEEECCHHHHHHHHHCCCEEECCCCH
RLRRERSRHDRRVFRQRLYTRLFAEARTLVLRDVDIVNLCNYSVEGDNVIYDCAGKLIVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEHCCCCCCCCCEEEECCCHHHHH
SRRKPQQGFWLRPGWARGLLAGLHTRDGDVLAFVESFNPVEPRLVVKVGRDIEPNAVHGV
CCCCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCE
TLGWVRLGDNYVEQEHLPVDVYPLAVLRSKQVRRR
EEEEEEECCCHHHHCCCCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
GCVELAPGEGLWVSGPARVEVSSGELLASGYTIAAGGEALVRGVRGFTFYATTASRVCV
CCCEECCCCCEEECCCCEEEECCCCEEECCEEEEECCHHHHHHHCCEEEEEEHHHHHHH
SLGAGASMNRVSEGYDVALSWLKLGEELARSGVHRVLVVGPVESGKSTLTAWLRNILGAC
HHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHE
VVEADVGQNELGTPAMVSYAPFDGAKLVLEDAGAVGGFFVGHVSAERAAELVVAATARAA
EEECCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH
MRCGGQRIVVDTDGYVQGRGVVYKAALAETLNVDVVISLDQGLAKALRARGLEVVEAPQP
HHCCCCEEEEECCCEEECCCEEEEEHHHHHCCEEEEEECCHHHHHHHHHCCCEEECCCCH
RLRRERSRHDRRVFRQRLYTRLFAEARTLVLRDVDIVNLCNYSVEGDNVIYDCAGKLIVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEHCCCCCCCCCEEEECCCHHHHH
SRRKPQQGFWLRPGWARGLLAGLHTRDGDVLAFVESFNPVEPRLVVKVGRDIEPNAVHGV
CCCCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCE
TLGWVRLGDNYVEQEHLPVDVYPLAVLRSKQVRRR
EEEEEEECCCHHHHCCCCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]