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The map label for this gene is pyrK [H]

Identifier: 124027008

GI number: 124027008

Start: 97253

End: 98026

Strand: Reverse

Name: pyrK [H]

Synonym: Hbut_0108

Alternate gene names: 124027008

Gene position: 98026-97253 (Counterclockwise)

Preceding gene: 124027009

Following gene: 124027007

Centisome position: 5.88

GC content: 60.08

Gene sequence:

>774_bases
GTGCAACGCTACAGCTACCATAGCGTTGAGCTTGTGCGCATACTATGGCGAGGTCCGCGTCAGGTTATGCTAGAGTATCG
CTACCTAGACAGTGCCCCGTCTCTCTCGCCGGGACAGTTTATACTGTTCTGGGTTCCAGGCTCAGAGGCCATACCGTTGA
CACCCCTCTACAGTGATGCTAGTAGATTGGTTCTGCTAGTAGTTGAGCGGGGCCCGACTACTGCCAGGCTCGTCTCGTCG
CCTCCGCGCCATGCTGGCGTCATAGCTGTTCTGGGTAGGCGGTTCACCTACCGCGGGGACGAGATGGTGTTCCTAGCCGG
TGGCGTTGGCGTGGCAGCTGTGGCTATGGCTGCGAGGGAGGCAGCGCAGTCAGGTGTAAGGGTTACAGTTTTCTATGGTG
CCCGTAGTGCCGGCGAGCTAGCACCCGTCGAGGAGTTCCTAGGCGGTGCCAGGGTCATCTACGCGACGGATGATGGTAGC
CGAGGACTCCGGGGAACAGTGCTTGACGCACTTCACGCCAGCGGGCTCCGTGTAGGCGATGTATACACGGTTGTTGCTGG
CCCAAAACCCCTACTGTGCAGGGCTTACAGCGAGGCCGCTGAGGCTGGGCAGCTGGAACGGCTTGCCCTCAGCATAGAGA
CAATGGTTAGATGTGGCCTCGGCTTCTGTGGGAGCTGCACCATACCCTGCACAGGCATGCTGCTCTGCCGTGACGGTCCC
GTAGTTCCGGCTGTTAGGCTTGGCTGCTGGGTGGTGAGGGAGTGCCAGAACTAG

Upstream 100 bases:

>100_bases
GTGTAGTGTCGAGGCAGCCACTGGTGCTCCAGTGCGTCTATTGTGGTACCCTCGTATCGGAGGAGGATGTGGCCGAGCAA
TTAGCTGAGGGAGGCTAGGT

Downstream 100 bases:

>100_bases
CCATCTGCGGCCACCTCGTAGATGGCTATGGCGTCTACGGGAGTGGTTGCATCAACATTGAGGGAGACAGGATAGCTTCG
GTAACAAGTGAGCCCAGGGC

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQRYSYHSVELVRILWRGPRQVMLEYRYLDSAPSLSPGQFILFWVPGSEAIPLTPLYSDASRLVLLVVERGPTTARLVSS
PPRHAGVIAVLGRRFTYRGDEMVFLAGGVGVAAVAMAAREAAQSGVRVTVFYGARSAGELAPVEEFLGGARVIYATDDGS
RGLRGTVLDALHASGLRVGDVYTVVAGPKPLLCRAYSEAAEAGQLERLALSIETMVRCGLGFCGSCTIPCTGMLLCRDGP
VVPAVRLGCWVVRECQN

Sequences:

>Translated_257_residues
MQRYSYHSVELVRILWRGPRQVMLEYRYLDSAPSLSPGQFILFWVPGSEAIPLTPLYSDASRLVLLVVERGPTTARLVSS
PPRHAGVIAVLGRRFTYRGDEMVFLAGGVGVAAVAMAAREAAQSGVRVTVFYGARSAGELAPVEEFLGGARVIYATDDGS
RGLRGTVLDALHASGLRVGDVYTVVAGPKPLLCRAYSEAAEAGQLERLALSIETMVRCGLGFCGSCTIPCTGMLLCRDGP
VVPAVRLGCWVVRECQN
>Mature_257_residues
MQRYSYHSVELVRILWRGPRQVMLEYRYLDSAPSLSPGQFILFWVPGSEAIPLTPLYSDASRLVLLVVERGPTTARLVSS
PPRHAGVIAVLGRRFTYRGDEMVFLAGGVGVAAVAMAAREAAQSGVRVTVFYGARSAGELAPVEEFLGGARVIYATDDGS
RGLRGTVLDALHASGLRVGDVYTVVAGPKPLLCRAYSEAAEAGQLERLALSIETMVRCGLGFCGSCTIPCTGMLLCRDGP
VVPAVRLGCWVVRECQN

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 27591; Mature: 27591

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYSYHSVELVRILWRGPRQVMLEYRYLDSAPSLSPGQFILFWVPGSEAIPLTPLYSDA
CCCCCCHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
SRLVLLVVERGPTTARLVSSPPRHAGVIAVLGRRFTYRGDEMVFLAGGVGVAAVAMAARE
CEEEEEEEECCCCEEEECCCCCCCCCHHEEECCEEEECCCEEEEEECCHHHHHHHHHHHH
AAQSGVRVTVFYGARSAGELAPVEEFLGGARVIYATDDGSRGLRGTVLDALHASGLRVGD
HHHCCCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEECC
VYTVVAGPKPLLCRAYSEAAEAGQLERLALSIETMVRCGLGFCGSCTIPCTGMLLCRDGP
EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
VVPAVRLGCWVVRECQN
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRYSYHSVELVRILWRGPRQVMLEYRYLDSAPSLSPGQFILFWVPGSEAIPLTPLYSDA
CCCCCCHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
SRLVLLVVERGPTTARLVSSPPRHAGVIAVLGRRFTYRGDEMVFLAGGVGVAAVAMAARE
CEEEEEEEECCCCEEEECCCCCCCCCHHEEECCEEEECCCEEEEEECCHHHHHHHHHHHH
AAQSGVRVTVFYGARSAGELAPVEEFLGGARVIYATDDGSRGLRGTVLDALHASGLRVGD
HHHCCCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEECC
VYTVVAGPKPLLCRAYSEAAEAGQLERLALSIETMVRCGLGFCGSCTIPCTGMLLCRDGP
EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
VVPAVRLGCWVVRECQN
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]