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The map label for this gene is 124026955

Identifier: 124026955

GI number: 124026955

Start: 42878

End: 43081

Strand: Reverse

Name: 124026955

Synonym: Hbut_0052

Alternate gene names: NA

Gene position: 43081-42878 (Counterclockwise)

Preceding gene: 124026960

Following gene: 124026953

Centisome position: 2.58

GC content: 51.47

Gene sequence:

>204_bases
ATGGAGCTTTATGAGCCACGTGAAGCGGGCGAGTATGGCGTTATAGAGGATAAGTCGCTGATACGCTACAAGTGCGGCAG
GTGTGGCATGGAGTTTAGCGCCCTCGACCTAGAGTATATGCCTACGATTAAGTGTCCCTACTGTGGCTATAGGGTTGTAT
ACAAGGTTAGGCCTCCGGGTAGAAAGCTCGTCAAGGCTGTCTAG

Upstream 100 bases:

>100_bases
CAAGCGTTGTCTCTACGCTTTGTGTCCAGTCAGCACCTCCCCCCAGAGCTATTCTTATAAGGATTTCGGGGCCAGCTTAC
CACCCTACCGGGTGCAAGTT

Downstream 100 bases:

>100_bases
CTGCTCGGCGCGCTACATGGTTTGCGGCTATGGCTTCTACCACTGTTTTTGCTGCTAGTATGCTCGTTATCCAGGAGCAG
TCGTAGGGTGGTGAGACCTC

Product: DNA-directed RNA polymerase, subunit P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MELYEPREAGEYGVIEDKSLIRYKCGRCGMEFSALDLEYMPTIKCPYCGYRVVYKVRPPGRKLVKAV

Sequences:

>Translated_67_residues
MELYEPREAGEYGVIEDKSLIRYKCGRCGMEFSALDLEYMPTIKCPYCGYRVVYKVRPPGRKLVKAV
>Mature_67_residues
MELYEPREAGEYGVIEDKSLIRYKCGRCGMEFSALDLEYMPTIKCPYCGYRVVYKVRPPGRKLVKAV

Specific function: Unknown

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7770; Mature: 7770

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYEPREAGEYGVIEDKSLIRYKCGRCGMEFSALDLEYMPTIKCPYCGYRVVYKVRPPG
CCCCCCCCCCCCCCEECCCEEEEECCCCCCEECCCCEECCCCCCCCCCCEEEEEEECCCC
RKLVKAV
HHHHHCC
>Mature Secondary Structure
MELYEPREAGEYGVIEDKSLIRYKCGRCGMEFSALDLEYMPTIKCPYCGYRVVYKVRPPG
CCCCCCCCCCCCCCEECCCEEEEECCCCCCEECCCCEECCCCCCCCCCCEEEEEEECCCC
RKLVKAV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA