| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is pyrG
Identifier: 124026868
GI number: 124026868
Start: 1820216
End: 1821883
Strand: Direct
Name: pyrG
Synonym: NATL1_21631
Alternate gene names: 124026868
Gene position: 1820216-1821883 (Clockwise)
Preceding gene: 124026867
Following gene: 124026869
Centisome position: 97.61
GC content: 39.15
Gene sequence:
>1668_bases ATGGCAAAATTTGTTTTCGTCACTGGTGGTGTAGTTTCAAGCATTGGCAAAGGAATTGTTGCCGCAAGTCTTGGCAGACT ACTTAAATCAAAAGGGTACAGTGTTTCGATTTTGAAGCTTGACCCATATTTAAATGTTGATCCTGGGACGATGAGCCCAT TTCAACATGGAGAAGTTTTTGTAACTGAAGACGGGGCTGAAACTGATTTGGACCTTGGGCATTATGAGCGCTTTACAGAC ACTGCAATGTCAAGACTAAACAGTGTCACGACAGGTTCCATTTATCAAGCTGTTATTAATAAAGAAAGAAGAGGTGACTA TGACGGAAGGACGGTTCAAGTAATCCCCCACATCACTCGTGAAATTCGCGAAAGAATTAAACGTGTAGCAAACAATAGTG GTGCAGATGTAGTGATATCAGAAATTGGAGGAACAGTTGGAGATATTGAATCTCTACCTTTTCTTGAAGCAATAAGAGAA TTTAAAGGAGATGTAAAAAGAAACGATGTTGTTTATGTTCACGTCACATTATTGCCTTACATAGGTACATCTGGAGAAAT TAAAACCAAGCCAACACAGCACTCAGTAAAAGAATTGCGTTCTATAGGTATTCAGCCAGATATTTTAGTTTGTCGCAGTG ATAGGCCTATTAATGATGAATTAAAAAATAAAATAGGGGGTTTCTGTGGAGTTAACTCTGAAGCGGTCATAGCATCCTTA GATGCTGACAGTATTTACTCAGTACCATTAGCGCTCAAAGATGAGGGACTTTGCAAGGAAGTATTAGATTGCTTGGATCT AAATGATCATGAAAGTGATTTAAAAGACTGGGAACGATTAGTCCATAAATTGCGCAATCCAGGTCCTTCTGTCAAAGTTG CATTAGTTGGCAAATATGTACAATTAAATGATGCCTACTTATCAGTAGTCGAAGCATTACGTCACGCATGTATCTCGCAT GATGCGTCTTTAGATCTTCACTGGATCAATGCGGAAAACATAGAATCCGAGGGAGCTGAAAAACTACTGCAGGGAATGGA CGCAATTGTCGTTCCAGGAGGTTTTGGTAACCGTGGCGTCAATGGGAAAATAGCTGCTATTAGATGGGCAAGGGAGCAAA GAGTACCTTTTTTAGGGCTTTGCTTAGGTATGCAATGTGCTGTCATTGAATGGGCTCGCAATATCGCTGGTTTAGAAGAT GCATCTAGTGCCGAACTAAATCCGAATTCAAAACACCCAGTAATTCACTTACTTCCAGAACAACAAGACGTCGTTGATCT AGGAGGAACAATGAGATTAGGCGTATATCCTTGTAGACTTCAAGCAAACACAACAGGACAAAGTTTATACAACGAAGAAG TTGTTTACGAAAGGCATAGACATCGTTATGAATTCAATAATTCATACAGAACTCTACTAATGGAATCTGGGTATGTAATT AGTGGTACTTCACCTGATGGTCGATTAGTAGAGTTAATAGAATTAAAAAATCACCCATTTTTTATTGCATGTCAATATCA TCCAGAATTCCTCTCTAGACCAGGAAAACCACACCCTTTATTTGGTGGTTTGATTCAAGCCGCACAAATACGTGTACCAT CCTCACCGAGTGAGGCATTTAATCCTCAATCAAAAATTATTGAAAAAAAATCACTAGAACAGCAATAG
Upstream 100 bases:
>100_bases ACTAGAAATTAGCGGTAAAAACATTATCCTAAAGAGAAAATATGTAAATTTCTTGGCGTTTACCTAGATCAAGGTAGCTT AAAGAATGATTGAAAAGTAA
Downstream 100 bases:
>100_bases ATGGGATCTTCTCTACCAGTAGTTGAATGTTTTCATTCTCTACAAGGAGAAGGAGAACATGCAGGTAGAAGCGCTTACTT CATCAGATTGGCTAGTTGTA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MAKFVFVTGGVVSSIGKGIVAASLGRLLKSKGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTD TAMSRLNSVTTGSIYQAVINKERRGDYDGRTVQVIPHITREIRERIKRVANNSGADVVISEIGGTVGDIESLPFLEAIRE FKGDVKRNDVVYVHVTLLPYIGTSGEIKTKPTQHSVKELRSIGIQPDILVCRSDRPINDELKNKIGGFCGVNSEAVIASL DADSIYSVPLALKDEGLCKEVLDCLDLNDHESDLKDWERLVHKLRNPGPSVKVALVGKYVQLNDAYLSVVEALRHACISH DASLDLHWINAENIESEGAEKLLQGMDAIVVPGGFGNRGVNGKIAAIRWAREQRVPFLGLCLGMQCAVIEWARNIAGLED ASSAELNPNSKHPVIHLLPEQQDVVDLGGTMRLGVYPCRLQANTTGQSLYNEEVVYERHRHRYEFNNSYRTLLMESGYVI SGTSPDGRLVELIELKNHPFFIACQYHPEFLSRPGKPHPLFGGLIQAAQIRVPSSPSEAFNPQSKIIEKKSLEQQ
Sequences:
>Translated_555_residues MAKFVFVTGGVVSSIGKGIVAASLGRLLKSKGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTD TAMSRLNSVTTGSIYQAVINKERRGDYDGRTVQVIPHITREIRERIKRVANNSGADVVISEIGGTVGDIESLPFLEAIRE FKGDVKRNDVVYVHVTLLPYIGTSGEIKTKPTQHSVKELRSIGIQPDILVCRSDRPINDELKNKIGGFCGVNSEAVIASL DADSIYSVPLALKDEGLCKEVLDCLDLNDHESDLKDWERLVHKLRNPGPSVKVALVGKYVQLNDAYLSVVEALRHACISH DASLDLHWINAENIESEGAEKLLQGMDAIVVPGGFGNRGVNGKIAAIRWAREQRVPFLGLCLGMQCAVIEWARNIAGLED ASSAELNPNSKHPVIHLLPEQQDVVDLGGTMRLGVYPCRLQANTTGQSLYNEEVVYERHRHRYEFNNSYRTLLMESGYVI SGTSPDGRLVELIELKNHPFFIACQYHPEFLSRPGKPHPLFGGLIQAAQIRVPSSPSEAFNPQSKIIEKKSLEQQ >Mature_554_residues AKFVFVTGGVVSSIGKGIVAASLGRLLKSKGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDT AMSRLNSVTTGSIYQAVINKERRGDYDGRTVQVIPHITREIRERIKRVANNSGADVVISEIGGTVGDIESLPFLEAIREF KGDVKRNDVVYVHVTLLPYIGTSGEIKTKPTQHSVKELRSIGIQPDILVCRSDRPINDELKNKIGGFCGVNSEAVIASLD ADSIYSVPLALKDEGLCKEVLDCLDLNDHESDLKDWERLVHKLRNPGPSVKVALVGKYVQLNDAYLSVVEALRHACISHD ASLDLHWINAENIESEGAEKLLQGMDAIVVPGGFGNRGVNGKIAAIRWAREQRVPFLGLCLGMQCAVIEWARNIAGLEDA SSAELNPNSKHPVIHLLPEQQDVVDLGGTMRLGVYPCRLQANTTGQSLYNEEVVYERHRHRYEFNNSYRTLLMESGYVIS GTSPDGRLVELIELKNHPFFIACQYHPEFLSRPGKPHPLFGGLIQAAQIRVPSSPSEAFNPQSKIIEKKSLEQQ
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=552, Percent_Identity=46.3768115942029, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI28559085, Length=548, Percent_Identity=45.8029197080292, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI28559083, Length=548, Percent_Identity=45.8029197080292, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI221316689, Length=548, Percent_Identity=45.8029197080292, Blast_Score=483, Evalue=1e-136, Organism=Escherichia coli, GI1789142, Length=535, Percent_Identity=54.392523364486, Blast_Score=586, Evalue=1e-168, Organism=Caenorhabditis elegans, GI25148299, Length=623, Percent_Identity=38.5232744783307, Blast_Score=426, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6322563, Length=562, Percent_Identity=44.4839857651246, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=43.3691756272401, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24664469, Length=554, Percent_Identity=48.014440433213, Blast_Score=499, Evalue=1e-141, Organism=Drosophila melanogaster, GI21357815, Length=499, Percent_Identity=47.0941883767535, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_PROM1 (A2C5F9)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001015983.1 - ProteinModelPortal: A2C5F9 - SMR: A2C5F9 - STRING: A2C5F9 - GeneID: 4779795 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_21631 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: PMAR167555:NATL1_21631-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 61258; Mature: 61126
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 381-381 ACT_SITE 507-507 ACT_SITE 509-509
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFVFVTGGVVSSIGKGIVAASLGRLLKSKGYSVSILKLDPYLNVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDTAMSRLNSVTTGSIYQAVINKERRGDYDGRTVQVIPHITR EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIRERIKRVANNSGADVVISEIGGTVGDIESLPFLEAIREFKGDVKRNDVVYVHVTLLPY HHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEC IGTSGEIKTKPTQHSVKELRSIGIQPDILVCRSDRPINDELKNKIGGFCGVNSEAVIASL CCCCCCEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEC DADSIYSVPLALKDEGLCKEVLDCLDLNDHESDLKDWERLVHKLRNPGPSVKVALVGKYV CCCCEEECCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE QLNDAYLSVVEALRHACISHDASLDLHWINAENIESEGAEKLLQGMDAIVVPGGFGNRGV EECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCC NGKIAAIRWAREQRVPFLGLCLGMQCAVIEWARNIAGLEDASSAELNPNSKHPVIHLLPE CCEEEEEEEHHHHCCCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC QQDVVDLGGTMRLGVYPCRLQANTTGQSLYNEEVVYERHRHRYEFNNSYRTLLMESGYVI CCCHHHCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEE SGTSPDGRLVELIELKNHPFFIACQYHPEFLSRPGKPHPLFGGLIQAAQIRVPSSPSEAF ECCCCCCCEEEEEEECCCCEEEEEEECHHHHCCCCCCCCHHHHHHHHHEEECCCCCHHHC NPQSKIIEKKSLEQQ CCHHHHHHHHHCCCC >Mature Secondary Structure AKFVFVTGGVVSSIGKGIVAASLGRLLKSKGYSVSILKLDPYLNVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDTAMSRLNSVTTGSIYQAVINKERRGDYDGRTVQVIPHITR EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHH EIRERIKRVANNSGADVVISEIGGTVGDIESLPFLEAIREFKGDVKRNDVVYVHVTLLPY HHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEC IGTSGEIKTKPTQHSVKELRSIGIQPDILVCRSDRPINDELKNKIGGFCGVNSEAVIASL CCCCCCEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEC DADSIYSVPLALKDEGLCKEVLDCLDLNDHESDLKDWERLVHKLRNPGPSVKVALVGKYV CCCCEEECCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE QLNDAYLSVVEALRHACISHDASLDLHWINAENIESEGAEKLLQGMDAIVVPGGFGNRGV EECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCC NGKIAAIRWAREQRVPFLGLCLGMQCAVIEWARNIAGLEDASSAELNPNSKHPVIHLLPE CCEEEEEEEHHHHCCCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC QQDVVDLGGTMRLGVYPCRLQANTTGQSLYNEEVVYERHRHRYEFNNSYRTLLMESGYVI CCCHHHCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEE SGTSPDGRLVELIELKNHPFFIACQYHPEFLSRPGKPHPLFGGLIQAAQIRVPSSPSEAF ECCCCCCCEEEEEEECCCCEEEEEEECHHHHCCCCCCCCHHHHHHHHHEEECCCCCHHHC NPQSKIIEKKSLEQQ CCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA