| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yabN [H]
Identifier: 124026862
GI number: 124026862
Start: 1814148
End: 1814960
Strand: Direct
Name: yabN [H]
Synonym: NATL1_21571
Alternate gene names: 124026862
Gene position: 1814148-1814960 (Clockwise)
Preceding gene: 124026860
Following gene: 124026863
Centisome position: 97.29
GC content: 31.86
Gene sequence:
>813_bases ATGACAAACACAAACCAAATAAATACAAAAGATAAACTGAATAAACTCCTTGAAGTAGTTTCAGACCTAAGAGATCCAAT CAATGGCTGTCCTTGGGACCTAAAGCAAACGCATCTTTCTTTGGTCCCATATGTTCTAGAAGAAGCCTATGAAGTTGCTC ACGCAATAAGAGAAGACAATCCTGATGAATTAAAAGAGGAGCTTGGAGATCTCTTACTACAAGTAATTTTGCATGCTCAA ATAGCAAAAGAAAAAAACTTATTTGACATAACAGACATCATTGACATGATCACTGAAAAACTAATTCGAAGGCATCCACA TGTATTTCAGAATAAAGCAAAAGTAAGCATCAAAGAAGTGGAAGACTCTTGGGAAACAATCAAGAATAATGAAAAACCAT TAAATAATTCAAAAACCCCAATTAGTGACCGATTAAAACTAAAGATAAGGCCACAACCTTCTACGAAAGCAGCACTAATT ATCTCCAAAAAAGCTTCAAAAAACGGATTTGAATGGGAAAACATTGATCAAATCTGGGATAAATTACATGAAGAATTAGA AGAATTAAAAGATGCATTAAAAAAAGAAAATACTGCCGAAGCTGAAGCTGAAATAGGAGACGTATTATTTACATTGATAA ATATTGCAAGATGGAATAAAATTTCCTTAGAAGATGGGTTAGCAAAAACTAATAAAAAATTCCTAGAACGATTAACATAT ATAGAAGAAAATATAGATGGCGAATTACATTCCCAATCAAAAAAGAAATTAGAAAAATATTGGAAATTAGCGAAGATCAA TCTCAAGCATTAA
Upstream 100 bases:
>100_bases CCTCAAGCTGCTCTGTTGTTGAGAATTAATCATAATTAGATCAACGATTCAAAAAAAATCGTTTCTGAGCTTTTTAAAAG TTCTATCAAGACAACTAGAA
Downstream 100 bases:
>100_bases TATCATAATTATGAATTACAAACTAAAAACAAGGTCAGGGTGGCTTGACGAGTATCATCAAGGCGTTAGATATGGACTAG AGGGAAAATTAATACTAGAA
Product: MazG family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTNTNQINTKDKLNKLLEVVSDLRDPINGCPWDLKQTHLSLVPYVLEEAYEVAHAIREDNPDELKEELGDLLLQVILHAQ IAKEKNLFDITDIIDMITEKLIRRHPHVFQNKAKVSIKEVEDSWETIKNNEKPLNNSKTPISDRLKLKIRPQPSTKAALI ISKKASKNGFEWENIDQIWDKLHEELEELKDALKKENTAEAEAEIGDVLFTLINIARWNKISLEDGLAKTNKKFLERLTY IEENIDGELHSQSKKKLEKYWKLAKINLKH
Sequences:
>Translated_270_residues MTNTNQINTKDKLNKLLEVVSDLRDPINGCPWDLKQTHLSLVPYVLEEAYEVAHAIREDNPDELKEELGDLLLQVILHAQ IAKEKNLFDITDIIDMITEKLIRRHPHVFQNKAKVSIKEVEDSWETIKNNEKPLNNSKTPISDRLKLKIRPQPSTKAALI ISKKASKNGFEWENIDQIWDKLHEELEELKDALKKENTAEAEAEIGDVLFTLINIARWNKISLEDGLAKTNKKFLERLTY IEENIDGELHSQSKKKLEKYWKLAKINLKH >Mature_269_residues TNTNQINTKDKLNKLLEVVSDLRDPINGCPWDLKQTHLSLVPYVLEEAYEVAHAIREDNPDELKEELGDLLLQVILHAQI AKEKNLFDITDIIDMITEKLIRRHPHVFQNKAKVSIKEVEDSWETIKNNEKPLNNSKTPISDRLKLKIRPQPSTKAALII SKKASKNGFEWENIDQIWDKLHEELEELKDALKKENTAEAEAEIGDVLFTLINIARWNKISLEDGLAKTNKKFLERLTYI EENIDGELHSQSKKKLEKYWKLAKINLKH
Specific function: Unknown
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789144, Length=260, Percent_Identity=36.5384615384615, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG; PF00590 TP_methylase [H]
EC number: NA
Molecular weight: Translated: 31355; Mature: 31224
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTNQINTKDKLNKLLEVVSDLRDPINGCPWDLKQTHLSLVPYVLEEAYEVAHAIREDN CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PDELKEELGDLLLQVILHAQIAKEKNLFDITDIIDMITEKLIRRHPHVFQNKAKVSIKEV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EDSWETIKNNEKPLNNSKTPISDRLKLKIRPQPSTKAALIISKKASKNGFEWENIDQIWD HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHH KLHEELEELKDALKKENTAEAEAEIGDVLFTLINIARWNKISLEDGLAKTNKKFLERLTY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IEENIDGELHSQSKKKLEKYWKLAKINLKH HHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TNTNQINTKDKLNKLLEVVSDLRDPINGCPWDLKQTHLSLVPYVLEEAYEVAHAIREDN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PDELKEELGDLLLQVILHAQIAKEKNLFDITDIIDMITEKLIRRHPHVFQNKAKVSIKEV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EDSWETIKNNEKPLNNSKTPISDRLKLKIRPQPSTKAALIISKKASKNGFEWENIDQIWD HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHH KLHEELEELKDALKKENTAEAEAEIGDVLFTLINIARWNKISLEDGLAKTNKKFLERLTY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IEENIDGELHSQSKKKLEKYWKLAKINLKH HHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]