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The map label for this gene is holA

Identifier: 124026820

GI number: 124026820

Start: 1769647

End: 1770675

Strand: Direct

Name: holA

Synonym: NATL1_21151

Alternate gene names: NA

Gene position: 1769647-1770675 (Clockwise)

Preceding gene: 124026818

Following gene: 124026821

Centisome position: 94.9

GC content: 31.68

Gene sequence:

>1029_bases
ATGCCAATACATTTAATCTGGGGGAATGATTATGAAGCCTGTAACAGAGAAATAGAAGAACTAATTAATTCAGTCATTGA
CTCCTCATGGAAAAGTTTCAATTATAGTCATCTAGATGGAAATGATCCTAAGCAAAATCTAAGAGCACTAGAAGAGGCTC
AAAGCGCTCCCTTAGGCAGCGGAGGCAGGATTGTGCTAGTTAGAAGAAGTCCATTTTGTAACGGATGCTCTATTGAGCTT
AGTAATAAACTTGAACAAGTAATCAAATTAATTCCTGATAAGACGCATCTCATTTTAAGTAATTCAAATAAACCTGATAA
AAGACTTAAAACTACTAAATTAATAGAAAAAAGCATCCAATCAAATACTTTATCACAGGAAAAAAGTTTTATTCTTCCAC
TACCATGGGATATCAATGGGCAAAGGAATTTAGTGAAGAATATTTTACAACAATTAAATCTAAAAATGAATTATGAAACA
ATTGATTTAATAGTAGAAAGTATAGGTAATGATAGCTCTTTAATCAATACTGAGCTTCAAAAGCTTTCATTATTCTCAGA
AGCAGTTAATACAAACTTAACTACAGATAAACCGCGAGAAATATCAAAAGAACTAGTCAAAAAACTAATTCAAAATAACT
CGACTAATGCACTAGAAATTGCCAATTCACTATTGAAAGGAGAGATAATTATAGCTCTAAATAAAATTCAATCCTTACTT
AAAAATGGAGAGCCAGCTTTACGATTAATAACAACGTTGACTGGTCAATCAAGAGGATGGCTTTGGGTACATCTATTAGA
TTCACAAGGGAATCAAGATGTCAAAGAAATAGCCAAACTTTCTGGGATTGCAAACCCAAAACGTATTTTTGTAATTCGCA
AACAAATTCAAGGTAAATCTTTGGAAACATTGCTTGAATTGATGAAAAAACTTTTAAAAATTGAAGCCTCAATAAAATCA
GGAATCAAGCCAATCGATTCTTTTAAAGATAATCTGCTAACACACAGTAAATTTTTGGCTAAGAACTGA

Upstream 100 bases:

>100_bases
TTGATGCTTTCTAGAAAAATTGGATGTTCTGATGTTTTCACTGTTAAATTTCTTTGGCTAATTTAAGATCAAACTCTTAT
TAATAAAATATCTCTAAGTA

Downstream 100 bases:

>100_bases
AATAATCAATAAGTTAACGTAAGTTCAATGGCATTGCTGGTTCAAAAATTTGGCGGCACCTCTCTAGGAAGTATTGAGCG
CATAAAAGCTGTCGCGCAAA

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPIHLIWGNDYEACNREIEELINSVIDSSWKSFNYSHLDGNDPKQNLRALEEAQSAPLGSGGRIVLVRRSPFCNGCSIEL
SNKLEQVIKLIPDKTHLILSNSNKPDKRLKTTKLIEKSIQSNTLSQEKSFILPLPWDINGQRNLVKNILQQLNLKMNYET
IDLIVESIGNDSSLINTELQKLSLFSEAVNTNLTTDKPREISKELVKKLIQNNSTNALEIANSLLKGEIIIALNKIQSLL
KNGEPALRLITTLTGQSRGWLWVHLLDSQGNQDVKEIAKLSGIANPKRIFVIRKQIQGKSLETLLELMKKLLKIEASIKS
GIKPIDSFKDNLLTHSKFLAKN

Sequences:

>Translated_342_residues
MPIHLIWGNDYEACNREIEELINSVIDSSWKSFNYSHLDGNDPKQNLRALEEAQSAPLGSGGRIVLVRRSPFCNGCSIEL
SNKLEQVIKLIPDKTHLILSNSNKPDKRLKTTKLIEKSIQSNTLSQEKSFILPLPWDINGQRNLVKNILQQLNLKMNYET
IDLIVESIGNDSSLINTELQKLSLFSEAVNTNLTTDKPREISKELVKKLIQNNSTNALEIANSLLKGEIIIALNKIQSLL
KNGEPALRLITTLTGQSRGWLWVHLLDSQGNQDVKEIAKLSGIANPKRIFVIRKQIQGKSLETLLELMKKLLKIEASIKS
GIKPIDSFKDNLLTHSKFLAKN
>Mature_341_residues
PIHLIWGNDYEACNREIEELINSVIDSSWKSFNYSHLDGNDPKQNLRALEEAQSAPLGSGGRIVLVRRSPFCNGCSIELS
NKLEQVIKLIPDKTHLILSNSNKPDKRLKTTKLIEKSIQSNTLSQEKSFILPLPWDINGQRNLVKNILQQLNLKMNYETI
DLIVESIGNDSSLINTELQKLSLFSEAVNTNLTTDKPREISKELVKKLIQNNSTNALEIANSLLKGEIIIALNKIQSLLK
NGEPALRLITTLTGQSRGWLWVHLLDSQGNQDVKEIAKLSGIANPKRIFVIRKQIQGKSLETLLELMKKLLKIEASIKSG
IKPIDSFKDNLLTHSKFLAKN

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 38472; Mature: 38341

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIHLIWGNDYEACNREIEELINSVIDSSWKSFNYSHLDGNDPKQNLRALEEAQSAPLGS
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GGRIVLVRRSPFCNGCSIELSNKLEQVIKLIPDKTHLILSNSNKPDKRLKTTKLIEKSIQ
CCEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
SNTLSQEKSFILPLPWDINGQRNLVKNILQQLNLKMNYETIDLIVESIGNDSSLINTELQ
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
KLSLFSEAVNTNLTTDKPREISKELVKKLIQNNSTNALEIANSLLKGEIIIALNKIQSLL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEHHHHHHHH
KNGEPALRLITTLTGQSRGWLWVHLLDSQGNQDVKEIAKLSGIANPKRIFVIRKQIQGKS
HCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCCC
LETLLELMKKLLKIEASIKSGIKPIDSFKDNLLTHSKFLAKN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIHLIWGNDYEACNREIEELINSVIDSSWKSFNYSHLDGNDPKQNLRALEEAQSAPLGS
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GGRIVLVRRSPFCNGCSIELSNKLEQVIKLIPDKTHLILSNSNKPDKRLKTTKLIEKSIQ
CCEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
SNTLSQEKSFILPLPWDINGQRNLVKNILQQLNLKMNYETIDLIVESIGNDSSLINTELQ
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
KLSLFSEAVNTNLTTDKPREISKELVKKLIQNNSTNALEIANSLLKGEIIIALNKIQSLL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEHHHHHHHH
KNGEPALRLITTLTGQSRGWLWVHLLDSQGNQDVKEIAKLSGIANPKRIFVIRKQIQGKS
HCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCCCC
LETLLELMKKLLKIEASIKSGIKPIDSFKDNLLTHSKFLAKN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA