| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026743
Identifier: 124026743
GI number: 124026743
Start: 1681042
End: 1681674
Strand: Reverse
Name: 124026743
Synonym: NATL1_20381
Alternate gene names: NA
Gene position: 1681674-1681042 (Counterclockwise)
Preceding gene: 124026744
Following gene: 124026741
Centisome position: 90.18
GC content: 39.97
Gene sequence:
>633_bases ATGCCTTTTGAAAATCAACAGCGTCTAACGCGTAGGAGAAGTTCTGCAGGTCCAACACCTCCTAGAAAGCCTCTTGGAGG CCAAACAGATGCGGGTATGCGACAAAATAGTGGCCCAAGACCAACTTTTTTAACCCTTAGAGATCATGGAAAAGTATATG TAGCTGATTTACCAAACTTGTCTGACGGACAACTTTCTCATATTGGGAAAGAAGCTGATGAAGTACTTACAAGTTTGGAG AGTAGAATTAATGACCTAGAACAAGAAGCAACTAATGGTCAAAGAGATAACGATACTTTGATTAAAGCTTCGACTAAGCA TGAAGTCACTCTAAGATTTATTCGAGCAATTCAGGACGAGCAAGAGCATAGAAAAAATAATCCTGCATTAAAAGATGCGG CATCAGAGTCTTTACCGCTCACGTTCCTTGAGGTAGCTAGGCATAGATTGCCAGGTGCAACCTTTGACTCGTTGTTGAGA GAGGCTTTAGAAGCTTGTGCTAATGATGAAAAAGAGCCTGAGAAAGAAATAATTGAAAAAAGCTCAAATTCACAGTCAAT TCCACCGGCAAAAGTTATCAATCTTCCAACCTCTTCAGATTCAATGAAGGTTATTGTTAGTCCTGATACTTAA
Upstream 100 bases:
>100_bases TAAAAAAGATTTTCTATAACGGTAAAAAAACAGTAAGATGTAAAAAAACGCAAGCCGGATATTAGTTCGGGTAATGCGAA GTTAGATCTTAATTAGCTCT
Downstream 100 bases:
>100_bases ATTTGGATTATGGACTAGTAAAAGGATTTAGTGGCATATTTGCTAGACATGCATTCCTGCAAAAATCGAGCTTTTGTTTT TCACTTTTAGTTAAAGACCA
Product: carboxylase domain-containing protein
Products: NA
Alternate protein names: Hpt Domain-Containing Protein
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPFENQQRLTRRRSSAGPTPPRKPLGGQTDAGMRQNSGPRPTFLTLRDHGKVYVADLPNLSDGQLSHIGKEADEVLTSLE SRINDLEQEATNGQRDNDTLIKASTKHEVTLRFIRAIQDEQEHRKNNPALKDAASESLPLTFLEVARHRLPGATFDSLLR EALEACANDEKEPEKEIIEKSSNSQSIPPAKVINLPTSSDSMKVIVSPDT
Sequences:
>Translated_210_residues MPFENQQRLTRRRSSAGPTPPRKPLGGQTDAGMRQNSGPRPTFLTLRDHGKVYVADLPNLSDGQLSHIGKEADEVLTSLE SRINDLEQEATNGQRDNDTLIKASTKHEVTLRFIRAIQDEQEHRKNNPALKDAASESLPLTFLEVARHRLPGATFDSLLR EALEACANDEKEPEKEIIEKSSNSQSIPPAKVINLPTSSDSMKVIVSPDT >Mature_209_residues PFENQQRLTRRRSSAGPTPPRKPLGGQTDAGMRQNSGPRPTFLTLRDHGKVYVADLPNLSDGQLSHIGKEADEVLTSLES RINDLEQEATNGQRDNDTLIKASTKHEVTLRFIRAIQDEQEHRKNNPALKDAASESLPLTFLEVARHRLPGATFDSLLRE ALEACANDEKEPEKEIIEKSSNSQSIPPAKVINLPTSSDSMKVIVSPDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23241; Mature: 23110
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFENQQRLTRRRSSAGPTPPRKPLGGQTDAGMRQNSGPRPTFLTLRDHGKVYVADLPNL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC SDGQLSHIGKEADEVLTSLESRINDLEQEATNGQRDNDTLIKASTKHEVTLRFIRAIQDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHH QEHRKNNPALKDAASESLPLTFLEVARHRLPGATFDSLLREALEACANDEKEPEKEIIEK HHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC SSNSQSIPPAKVINLPTSSDSMKVIVSPDT CCCCCCCCCHHEEECCCCCCCEEEEECCCC >Mature Secondary Structure PFENQQRLTRRRSSAGPTPPRKPLGGQTDAGMRQNSGPRPTFLTLRDHGKVYVADLPNL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC SDGQLSHIGKEADEVLTSLESRINDLEQEATNGQRDNDTLIKASTKHEVTLRFIRAIQDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHH QEHRKNNPALKDAASESLPLTFLEVARHRLPGATFDSLLREALEACANDEKEPEKEIIEK HHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC SSNSQSIPPAKVINLPTSSDSMKVIVSPDT CCCCCCCCCHHEEECCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA