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The map label for this gene is arnC [H]

Identifier: 124026667

GI number: 124026667

Start: 1620141

End: 1621103

Strand: Reverse

Name: arnC [H]

Synonym: NATL1_19621

Alternate gene names: 124026667

Gene position: 1621103-1620141 (Counterclockwise)

Preceding gene: 124026668

Following gene: 124026665

Centisome position: 86.93

GC content: 35.1

Gene sequence:

>963_bases
ATGAATTCTAATGTTGAACTATCAATAGTTGTTCCTATCTATAACGAAGAAGAAAGTCTTCCTTTTTTGGTGAATCAGTT
ATTAGAAGTTTTACAGCCTATGGAGGAAACTTTTGAAATAGTTTTAGTTAATGATGGTTCATCAGATAACAGCGCAGAGG
TAATTAGAAAACTAAGCTTTGATATACCAGAATTAGTTGGAGTTCTTCTGCGTAAAAACTATGGACAGACCGCTGCGATG
GCAGCAGGATTTGATATTTCTTCTGGAGAAATAGTTGTCACACTTGATGGTGACTTGCAAAATGATCCTGCAGATATTCC
GTTATTAGTTAATAAGATTAGGGATGGGTTTGATCTTGTAAGTGGATGGAGATATCGAAGGCAAGATGCTGCAATAAGTA
GAAAGCTTCCATCAAAAATTGCTAATCGATTGATTGGAAAAGTTACTGGTGTGCGACTTAATGATTATGGATGTTCTTTA
AAGGCTTATAGGAAAGAAGTACTGACAGATATGAGATTATATGGAGAATTGCATAGATTTTTGCCTGTTCTTGCAAATAT
TGAAGGAGCCAGAATTACAGAAGTTAAAGTCAATCATAGAGCCCGTCAATTTGGATCTAGTAAGTATGGAATAGATAGAA
CTTTTAGAGTCTTGATGGACTTGTTGACTGTTTGGTTTATGAATAGATTTTTAACTAGACCTATGTATGTATTTGGTTTT
GGTGGAATTCTTGCAATTATTGGGAGCTTCATAACAAGCTTTTACCTATTAACAATCAAACTTTTAGGAGAAGATATAGG
TAATAGGCCTTTACTTATTTTCGCTTTACTTCTTGCAGTGACTGGAGTTCAACTTTTTGGGTTTGGATTGCTTGGAGAGC
TTCAGATCCGCACATATCATGAAAGTCAAAATAGACCAATTTATCGGATTAGAGATACATTTCGAGGACGTCTAGAAACT
TGA

Upstream 100 bases:

>100_bases
TTTTTACAGATCTAAATTTAGATCTGCTGGAAGAGTGATCTCTTGTTATCAGAGTGAAAAACTCTAAAGAAGATTAATTG
AACTTTATGAGGAGTTTTGA

Downstream 100 bases:

>100_bases
GGTTTTTTATATAAATCAATAGTTTTTCCTTTATAAGATGAAATTCCAGTAGCAGAAGCAATAACAACCCTACTGTCAGA
ATCCTTCAATCCTCTTCTTA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNSNVELSIVVPIYNEEESLPFLVNQLLEVLQPMEETFEIVLVNDGSSDNSAEVIRKLSFDIPELVGVLLRKNYGQTAAM
AAGFDISSGEIVVTLDGDLQNDPADIPLLVNKIRDGFDLVSGWRYRRQDAAISRKLPSKIANRLIGKVTGVRLNDYGCSL
KAYRKEVLTDMRLYGELHRFLPVLANIEGARITEVKVNHRARQFGSSKYGIDRTFRVLMDLLTVWFMNRFLTRPMYVFGF
GGILAIIGSFITSFYLLTIKLLGEDIGNRPLLIFALLLAVTGVQLFGFGLLGELQIRTYHESQNRPIYRIRDTFRGRLET

Sequences:

>Translated_320_residues
MNSNVELSIVVPIYNEEESLPFLVNQLLEVLQPMEETFEIVLVNDGSSDNSAEVIRKLSFDIPELVGVLLRKNYGQTAAM
AAGFDISSGEIVVTLDGDLQNDPADIPLLVNKIRDGFDLVSGWRYRRQDAAISRKLPSKIANRLIGKVTGVRLNDYGCSL
KAYRKEVLTDMRLYGELHRFLPVLANIEGARITEVKVNHRARQFGSSKYGIDRTFRVLMDLLTVWFMNRFLTRPMYVFGF
GGILAIIGSFITSFYLLTIKLLGEDIGNRPLLIFALLLAVTGVQLFGFGLLGELQIRTYHESQNRPIYRIRDTFRGRLET
>Mature_320_residues
MNSNVELSIVVPIYNEEESLPFLVNQLLEVLQPMEETFEIVLVNDGSSDNSAEVIRKLSFDIPELVGVLLRKNYGQTAAM
AAGFDISSGEIVVTLDGDLQNDPADIPLLVNKIRDGFDLVSGWRYRRQDAAISRKLPSKIANRLIGKVTGVRLNDYGCSL
KAYRKEVLTDMRLYGELHRFLPVLANIEGARITEVKVNHRARQFGSSKYGIDRTFRVLMDLLTVWFMNRFLTRPMYVFGF
GGILAIIGSFITSFYLLTIKLLGEDIGNRPLLIFALLLAVTGVQLFGFGLLGELQIRTYHESQNRPIYRIRDTFRGRLET

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=30.3418803418803, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=38.6581469648562, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1788692, Length=311, Percent_Identity=26.6881028938907, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787259, Length=116, Percent_Identity=30.1724137931034, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71999402, Length=225, Percent_Identity=28.4444444444444, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24585265, Length=233, Percent_Identity=27.0386266094421, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36187; Mature: 36187

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNVELSIVVPIYNEEESLPFLVNQLLEVLQPMEETFEIVLVNDGSSDNSAEVIRKLSF
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHCC
DIPELVGVLLRKNYGQTAAMAAGFDISSGEIVVTLDGDLQNDPADIPLLVNKIRDGFDLV
CHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
SGWRYRRQDAAISRKLPSKIANRLIGKVTGVRLNDYGCSLKAYRKEVLTDMRLYGELHRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LPVLANIEGARITEVKVNHRARQFGSSKYGIDRTFRVLMDLLTVWFMNRFLTRPMYVFGF
HHHHHCCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GGILAIIGSFITSFYLLTIKLLGEDIGNRPLLIFALLLAVTGVQLFGFGLLGELQIRTYH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
ESQNRPIYRIRDTFRGRLET
CCCCCCEEEEHHHHCCCCCC
>Mature Secondary Structure
MNSNVELSIVVPIYNEEESLPFLVNQLLEVLQPMEETFEIVLVNDGSSDNSAEVIRKLSF
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHCC
DIPELVGVLLRKNYGQTAAMAAGFDISSGEIVVTLDGDLQNDPADIPLLVNKIRDGFDLV
CHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
SGWRYRRQDAAISRKLPSKIANRLIGKVTGVRLNDYGCSLKAYRKEVLTDMRLYGELHRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LPVLANIEGARITEVKVNHRARQFGSSKYGIDRTFRVLMDLLTVWFMNRFLTRPMYVFGF
HHHHHCCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GGILAIIGSFITSFYLLTIKLLGEDIGNRPLLIFALLLAVTGVQLFGFGLLGELQIRTYH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
ESQNRPIYRIRDTFRGRLET
CCCCCCEEEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA