| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124026509
Identifier: 124026509
GI number: 124026509
Start: 1474475
End: 1475017
Strand: Direct
Name: 124026509
Synonym: NATL1_18041
Alternate gene names: NA
Gene position: 1474475-1475017 (Clockwise)
Preceding gene: 124026508
Following gene: 124026514
Centisome position: 79.07
GC content: 37.02
Gene sequence:
>543_bases ATGCTTCTACATTTTGTTCCTATTCATGTTTTTCGTGAAACGCCACAAGTATCTTTTTTTGATGCAGGCGTAAATGGATC AAATGGTGCTGATGTTGTCATCCATCACAAAAACGCCATATCTCCTCCTGATGACGGCAATTTTGAGCAGTATTACATCC ATAATCATCAAGTTGATCACAATTTAGTGATTGAAGGGAGCCGAAAATTTACTCTTATTAACCCCAAATGGGATGAGCCG CATCATGTGATTTTTTTAAATAGAGCAATGGGCGCACTGCAAATTCCAATTGGAACTTATCACCGATCAGAATCAGGGAA AGAAGGAAGTATTGTTTTGAATCAAGCAACTAGAGATGATTTGTTTGATCAAAGAAAAGAATTCACACCTGTTAGCCTCA GATCAAACAAAGAATTAAGAAAGGCTAGACAGACTCATCCCGTCTACTGGATTTGGGAAGAAGAAAGAATAAAAAGATTA AAACTAGATTGCAAAGGATACTCCAAGAGCATTAAGTTAGAACCTTTAATACCTGCGCATTAA
Upstream 100 bases:
>100_bases AGCTCATGATTTATGTAAGGATATCTGCTTAGGTGAAAACTGGGATTTATAAATTAACTATTTTCGATTATGAATGATTT GTAGGAAAGGGGGTTTACAA
Downstream 100 bases:
>100_bases TACATGCAATAATACAGTTCATACTATAGTTAAAACATTCAGAGGATTATGCTCAACTAAAATCAGACATAATTATAGAA GATCACAACATAATATAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLLHFVPIHVFRETPQVSFFDAGVNGSNGADVVIHHKNAISPPDDGNFEQYYIHNHQVDHNLVIEGSRKFTLINPKWDEP HHVIFLNRAMGALQIPIGTYHRSESGKEGSIVLNQATRDDLFDQRKEFTPVSLRSNKELRKARQTHPVYWIWEEERIKRL KLDCKGYSKSIKLEPLIPAH
Sequences:
>Translated_180_residues MLLHFVPIHVFRETPQVSFFDAGVNGSNGADVVIHHKNAISPPDDGNFEQYYIHNHQVDHNLVIEGSRKFTLINPKWDEP HHVIFLNRAMGALQIPIGTYHRSESGKEGSIVLNQATRDDLFDQRKEFTPVSLRSNKELRKARQTHPVYWIWEEERIKRL KLDCKGYSKSIKLEPLIPAH >Mature_180_residues MLLHFVPIHVFRETPQVSFFDAGVNGSNGADVVIHHKNAISPPDDGNFEQYYIHNHQVDHNLVIEGSRKFTLINPKWDEP HHVIFLNRAMGALQIPIGTYHRSESGKEGSIVLNQATRDDLFDQRKEFTPVSLRSNKELRKARQTHPVYWIWEEERIKRL KLDCKGYSKSIKLEPLIPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20853; Mature: 20853
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLHFVPIHVFRETPQVSFFDAGVNGSNGADVVIHHKNAISPPDDGNFEQYYIHNHQVDH CEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC NLVIEGSRKFTLINPKWDEPHHVIFLNRAMGALQIPIGTYHRSESGKEGSIVLNQATRDD EEEEECCCEEEEECCCCCCCCEEEEEECCCCEEECCCCCEECCCCCCCCCEEEECCCHHH LFDQRKEFTPVSLRSNKELRKARQTHPVYWIWEEERIKRLKLDCKGYSKSIKLEPLIPAH HHHHHHHCCCEEECCCHHHHHHHHCCCEEEEECHHCEEEEEEECCCCCCEEEECCCCCCC >Mature Secondary Structure MLLHFVPIHVFRETPQVSFFDAGVNGSNGADVVIHHKNAISPPDDGNFEQYYIHNHQVDH CEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC NLVIEGSRKFTLINPKWDEPHHVIFLNRAMGALQIPIGTYHRSESGKEGSIVLNQATRDD EEEEECCCEEEEECCCCCCCCEEEEEECCCCEEECCCCCEECCCCCCCCCEEEECCCHHH LFDQRKEFTPVSLRSNKELRKARQTHPVYWIWEEERIKRLKLDCKGYSKSIKLEPLIPAH HHHHHHHCCCEEECCCHHHHHHHHCCCEEEEECHHCEEEEEEECCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA