Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026508

Identifier: 124026508

GI number: 124026508

Start: 1473697

End: 1474356

Strand: Direct

Name: 124026508

Synonym: NATL1_18031

Alternate gene names: NA

Gene position: 1473697-1474356 (Clockwise)

Preceding gene: 124026507

Following gene: 124026509

Centisome position: 79.03

GC content: 35.15

Gene sequence:

>660_bases
ATGACAGGAACAGATTGTACGCATTTATTTAAGTCTGCCTATGAAAATCGCTACACGTGGGAATCAGATTTTTCAGGTTA
CGAAGGTAGATGTTCTTGGACAGATGGCGAAAGAGTGGTAGAAGGAAGCTTTTGCTTAGGACAAGATTTAAAAGCCACTG
TTAAAGGAATAGATGACGAAAAAATACACAAAGCCATTTCTTCACAACTTTGGGAAGTCGCTATTCATAGAGTCAGAAGA
TCATTTGAACAAACACATGGTAAAAATACCTTTACTTTTGGAGATACAAATGACATTGGCTCAGAAGTTATAGTTGGAGG
AAAAAATGAAGGTGACAAATACAGGGTCAAAAACGATGTTGTTACGATGGTTTATAGGCATATTCATGGAAATCTAATAA
TCATCCTCACTAAGGATGTGACTCATACTGGTAATGGCTACTTAAGCAAGAGTTATTCCAGTCAATATCTTGATCCAATT
TCAAAAAAAGATTTAAAGGGAAAAAGCTTTTACGAAGATGCTTTCATACCTTTATTCAAAGGTGGGCCTTGGGTTTTATC
CTCTAGATCCATACATCAAGAAGCCTCAGAAGGTTCAATAATGAATAAACAAGTATTTTCTTTTTCGGAGTTAAAAAGTA
TTAATTCTAAGCAAGATTAG

Upstream 100 bases:

>100_bases
TATAAATAATTGTGTTTCGTAAATATATTTTTAATTAGTTTATTAAAATCTTTAATTGATTAAAATAAGTCATAAACTGA
GTTTTACGCTAACCAAGGAA

Downstream 100 bases:

>100_bases
TCTCCAAAACATTAGCTAAGCTCATGATTTATGTAAGGATATCTGCTTAGGTGAAAACTGGGATTTATAAATTAACTATT
TTCGATTATGAATGATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTGTDCTHLFKSAYENRYTWESDFSGYEGRCSWTDGERVVEGSFCLGQDLKATVKGIDDEKIHKAISSQLWEVAIHRVRR
SFEQTHGKNTFTFGDTNDIGSEVIVGGKNEGDKYRVKNDVVTMVYRHIHGNLIIILTKDVTHTGNGYLSKSYSSQYLDPI
SKKDLKGKSFYEDAFIPLFKGGPWVLSSRSIHQEASEGSIMNKQVFSFSELKSINSKQD

Sequences:

>Translated_219_residues
MTGTDCTHLFKSAYENRYTWESDFSGYEGRCSWTDGERVVEGSFCLGQDLKATVKGIDDEKIHKAISSQLWEVAIHRVRR
SFEQTHGKNTFTFGDTNDIGSEVIVGGKNEGDKYRVKNDVVTMVYRHIHGNLIIILTKDVTHTGNGYLSKSYSSQYLDPI
SKKDLKGKSFYEDAFIPLFKGGPWVLSSRSIHQEASEGSIMNKQVFSFSELKSINSKQD
>Mature_218_residues
TGTDCTHLFKSAYENRYTWESDFSGYEGRCSWTDGERVVEGSFCLGQDLKATVKGIDDEKIHKAISSQLWEVAIHRVRRS
FEQTHGKNTFTFGDTNDIGSEVIVGGKNEGDKYRVKNDVVTMVYRHIHGNLIIILTKDVTHTGNGYLSKSYSSQYLDPIS
KKDLKGKSFYEDAFIPLFKGGPWVLSSRSIHQEASEGSIMNKQVFSFSELKSINSKQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24757; Mature: 24626

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTDCTHLFKSAYENRYTWESDFSGYEGRCSWTDGERVVEGSFCLGQDLKATVKGIDDE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHCCCCHH
KIHKAISSQLWEVAIHRVRRSFEQTHGKNTFTFGDTNDIGSEVIVGGKNEGDKYRVKNDV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCEEHHHHH
VTMVYRHIHGNLIIILTKDVTHTGNGYLSKSYSSQYLDPISKKDLKGKSFYEDAFIPLFK
HHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCEEEEC
GGPWVLSSRSIHQEASEGSIMNKQVFSFSELKSINSKQD
CCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TGTDCTHLFKSAYENRYTWESDFSGYEGRCSWTDGERVVEGSFCLGQDLKATVKGIDDE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHCCCCHH
KIHKAISSQLWEVAIHRVRRSFEQTHGKNTFTFGDTNDIGSEVIVGGKNEGDKYRVKNDV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCEEHHHHH
VTMVYRHIHGNLIIILTKDVTHTGNGYLSKSYSSQYLDPISKKDLKGKSFYEDAFIPLFK
HHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCEEEEC
GGPWVLSSRSIHQEASEGSIMNKQVFSFSELKSINSKQD
CCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA