| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is plsY
Identifier: 124026459
GI number: 124026459
Start: 1435693
End: 1436289
Strand: Direct
Name: plsY
Synonym: NATL1_17541
Alternate gene names: 124026459
Gene position: 1435693-1436289 (Clockwise)
Preceding gene: 124026458
Following gene: 124026463
Centisome position: 76.99
GC content: 33.67
Gene sequence:
>597_bases TTGAATCTTTTAATTCTATTTTTTGGATATTTATTCGGATCTTTTCCTAGTGGTTATTTAGCCGGAAGAATTGCCAAAGG AATTGATATTCGTTCATTAGGTTCTGGGTCTACAGGAGCAACAAATGTATTAAGACATATAGGAAAGCGTGCAGCAATTA TAGTTTTTCTACTAGATGTATTCAAAGGAGTTCTATCTATTTTATTAGCGAAATATTTACTACTAAATGATTCTTGGCAA GTGGCTATAGGTCTATCAACTTTAATTGGTCACATTTGGCCTGTCTGGCTTAATTGGAAAGGTGGTAAAGCTGTAGCAAC AGGATTAGGAATATTTCTTGGTCTTTCATGGCAAGTTGGACTTGCCACTTTAGGTGTTTTCATCATAATGATTACATTAT TTAGAATAGTGTCACTTGCAAGTGTTAGTGCATCATTAGCTCTACCTTTAATAATGTTTCTAAGCTTTAGTGGTTCAAAT ATTTCTTTACCATTTTTGATTGTTTCACTATTAGCTATGTTATTAGTGATTTGGAGACATAGAGAGAATATAGTTAGGCT AATTAGGGGTAAAGAACCAAGAATCGGACAGCCCTAA
Upstream 100 bases:
>100_bases TTCCAATTCTTCAGTTTCCTATTTGGCTTGCTTTTGCAGGAAGTCCCAATGAAATTTATGAAGATGATGGATTAATATAA AAATTCCAATTGAAATTATT
Downstream 100 bases:
>100_bases GAAATTAAATACTAATTTTATCGCAAAAACTCTTAAACATATAAGCAGAATCATTTGATTGGGTAATTGCTCTTCCGATA ACTAACTTTGATGCTCCCAT
Product: membrane protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MNLLILFFGYLFGSFPSGYLAGRIAKGIDIRSLGSGSTGATNVLRHIGKRAAIIVFLLDVFKGVLSILLAKYLLLNDSWQ VAIGLSTLIGHIWPVWLNWKGGKAVATGLGIFLGLSWQVGLATLGVFIIMITLFRIVSLASVSASLALPLIMFLSFSGSN ISLPFLIVSLLAMLLVIWRHRENIVRLIRGKEPRIGQP
Sequences:
>Translated_198_residues MNLLILFFGYLFGSFPSGYLAGRIAKGIDIRSLGSGSTGATNVLRHIGKRAAIIVFLLDVFKGVLSILLAKYLLLNDSWQ VAIGLSTLIGHIWPVWLNWKGGKAVATGLGIFLGLSWQVGLATLGVFIIMITLFRIVSLASVSASLALPLIMFLSFSGSN ISLPFLIVSLLAMLLVIWRHRENIVRLIRGKEPRIGQP >Mature_198_residues MNLLILFFGYLFGSFPSGYLAGRIAKGIDIRSLGSGSTGATNVLRHIGKRAAIIVFLLDVFKGVLSILLAKYLLLNDSWQ VAIGLSTLIGHIWPVWLNWKGGKAVATGLGIFLGLSWQVGLATLGVFIIMITLFRIVSLASVSASLALPLIMFLSFSGSN ISLPFLIVSLLAMLLVIWRHRENIVRLIRGKEPRIGQP
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=191, Percent_Identity=35.6020942408377, Blast_Score=103, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_PROM1 (A2C4A0)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001015574.1 - STRING: A2C4A0 - GeneID: 4780613 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_17541 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: VLGWKAG - ProtClustDB: PRK14419 - BioCyc: PMAR167555:NATL1_17541-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 21530; Mature: 21530
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x21c7ea54)-; HASH(0x21c081fc)-; HASH(0x217bd624)-; HASH(0x2136d97c)-; HASH(0x2214d038)-; HASH(0x21d14044)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLILFFGYLFGSFPSGYLAGRIAKGIDIRSLGSGSTGATNVLRHIGKRAAIIVFLLDV CHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FKGVLSILLAKYLLLNDSWQVAIGLSTLIGHIWPVWLNWKGGKAVATGLGIFLGLSWQVG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHH LATLGVFIIMITLFRIVSLASVSASLALPLIMFLSFSGSNISLPFLIVSLLAMLLVIWRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RENIVRLIRGKEPRIGQP HHHHHHHHCCCCCCCCCH >Mature Secondary Structure MNLLILFFGYLFGSFPSGYLAGRIAKGIDIRSLGSGSTGATNVLRHIGKRAAIIVFLLDV CHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FKGVLSILLAKYLLLNDSWQVAIGLSTLIGHIWPVWLNWKGGKAVATGLGIFLGLSWQVG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHH LATLGVFIIMITLFRIVSLASVSASLALPLIMFLSFSGSNISLPFLIVSLLAMLLVIWRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RENIVRLIRGKEPRIGQP HHHHHHHHCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA