| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026458
Identifier: 124026458
GI number: 124026458
Start: 1434644
End: 1435672
Strand: Direct
Name: 124026458
Synonym: NATL1_17531
Alternate gene names: NA
Gene position: 1434644-1435672 (Clockwise)
Preceding gene: 124026457
Following gene: 124026459
Centisome position: 76.94
GC content: 38.39
Gene sequence:
>1029_bases ATGGAATCCGAAGAAAATCTATCTAAAGAGAAACAAAATTCAAAACAGAATATTTCTGTGGACAATTCTTCTTCAATAAA AAATACATCTCAAAAACCACTCGAGAAGCAAACTAAATCACAAAGTGTAATTAGTCCTGAAAACAATCAAAAAGCCTCTA GCGCGCAGACGCAGCCTTTCATTGACATTGCGCTTAAAGATCTTCATCTCTCACGTCAGCAGTTAGAGAAAGAATTAGAG GAGCTTTCTCAAAAAAAAGTACAAATTGAAACTGAGCTTAAAAGCTCATTTACAGGCCAATCTGATGCGATAGCAAGAAA AGTTAAAGGTTTTCAGGAATATTTAACTGGTGCATTACAAGATCTAGCTCATTCAGCTGAGCAACTAGAGCTGGTTGTTC CGCCAGTTATTGTTAAGCCATCGCCACTTGATGAAAATAAAAAAATTGAGCCTCCTAAAGAGCAAGAAGTTATCTCTGCT GTTTCTGATACTTTCAAACCTGATGAGACTTTAATCAGAAGCTGCTTTAGTCAATTTCTAGAACAACCCGATTTCTATGC TGAACCCTGGAAACTTAGAAGAAGTCTTGAATCAATTGATATTGAAATGCTTGAAGATTGGTTCTTCAGCATGGGGGGAA GAGGCGCTCAACCAAGCAGAGGGAGTCGATCAAAGAATGCTTTAGTTGCCGCAGGGATCATTGCAATTTTAGGTGAGTTA TACGGCGAACAATTTCAGACTTTAGTTTTAGCGAGTCAACCAGAGCGACTGGGAGAATGGAGAAGATGTCTCCAAGATTC ATTAGGACTTAGCCGTGAGGATTTCGGGCCAAATAGCGGAATAGTTCTTTTCGAGAGATCCGATGGACTAATTGAAAGAG CAGATCGACTTGAAGAAAGAGGTGAGTTGCCTTTGATAATTATTGATGCGGCTGAAATTAATGTAGAAATTCCAATTCTT CAGTTTCCTATTTGGCTTGCTTTTGCAGGAAGTCCCAATGAAATTTATGAAGATGATGGATTAATATAA
Upstream 100 bases:
>100_bases AACTCATTAGAAGAACAGCTAAGGTTAAGGGTCAAGGATTTAGAAATACAAAAAGAAGTAGACTCATGAAAATCTAAAAC TTAATTGAAGTTTTTGAAAT
Downstream 100 bases:
>100_bases AAATTCCAATTGAAATTATTTTGAATCTTTTAATTCTATTTTTTGGATATTTATTCGGATCTTTTCCTAGTGGTTATTTA GCCGGAAGAATTGCCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MESEENLSKEKQNSKQNISVDNSSSIKNTSQKPLEKQTKSQSVISPENNQKASSAQTQPFIDIALKDLHLSRQQLEKELE ELSQKKVQIETELKSSFTGQSDAIARKVKGFQEYLTGALQDLAHSAEQLELVVPPVIVKPSPLDENKKIEPPKEQEVISA VSDTFKPDETLIRSCFSQFLEQPDFYAEPWKLRRSLESIDIEMLEDWFFSMGGRGAQPSRGSRSKNALVAAGIIAILGEL YGEQFQTLVLASQPERLGEWRRCLQDSLGLSREDFGPNSGIVLFERSDGLIERADRLEERGELPLIIIDAAEINVEIPIL QFPIWLAFAGSPNEIYEDDGLI
Sequences:
>Translated_342_residues MESEENLSKEKQNSKQNISVDNSSSIKNTSQKPLEKQTKSQSVISPENNQKASSAQTQPFIDIALKDLHLSRQQLEKELE ELSQKKVQIETELKSSFTGQSDAIARKVKGFQEYLTGALQDLAHSAEQLELVVPPVIVKPSPLDENKKIEPPKEQEVISA VSDTFKPDETLIRSCFSQFLEQPDFYAEPWKLRRSLESIDIEMLEDWFFSMGGRGAQPSRGSRSKNALVAAGIIAILGEL YGEQFQTLVLASQPERLGEWRRCLQDSLGLSREDFGPNSGIVLFERSDGLIERADRLEERGELPLIIIDAAEINVEIPIL QFPIWLAFAGSPNEIYEDDGLI >Mature_342_residues MESEENLSKEKQNSKQNISVDNSSSIKNTSQKPLEKQTKSQSVISPENNQKASSAQTQPFIDIALKDLHLSRQQLEKELE ELSQKKVQIETELKSSFTGQSDAIARKVKGFQEYLTGALQDLAHSAEQLELVVPPVIVKPSPLDENKKIEPPKEQEVISA VSDTFKPDETLIRSCFSQFLEQPDFYAEPWKLRRSLESIDIEMLEDWFFSMGGRGAQPSRGSRSKNALVAAGIIAILGEL YGEQFQTLVLASQPERLGEWRRCLQDSLGLSREDFGPNSGIVLFERSDGLIERADRLEERGELPLIIIDAAEINVEIPIL QFPIWLAFAGSPNEIYEDDGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38389; Mature: 38389
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESEENLSKEKQNSKQNISVDNSSSIKNTSQKPLEKQTKSQSVISPENNQKASSAQTQPF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH IDIALKDLHLSRQQLEKELEELSQKKVQIETELKSSFTGQSDAIARKVKGFQEYLTGALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DLAHSAEQLELVVPPVIVKPSPLDENKKIEPPKEQEVISAVSDTFKPDETLIRSCFSQFL HHHHHHHHEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EQPDFYAEPWKLRRSLESIDIEMLEDWFFSMGGRGAQPSRGSRSKNALVAAGIIAILGEL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YGEQFQTLVLASQPERLGEWRRCLQDSLGLSREDFGPNSGIVLFERSDGLIERADRLEER HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHC GELPLIIIDAAEINVEIPILQFPIWLAFAGSPNEIYEDDGLI CCCCEEEEEECEEEEEEEEEECCEEEEECCCCCHHCCCCCCC >Mature Secondary Structure MESEENLSKEKQNSKQNISVDNSSSIKNTSQKPLEKQTKSQSVISPENNQKASSAQTQPF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH IDIALKDLHLSRQQLEKELEELSQKKVQIETELKSSFTGQSDAIARKVKGFQEYLTGALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DLAHSAEQLELVVPPVIVKPSPLDENKKIEPPKEQEVISAVSDTFKPDETLIRSCFSQFL HHHHHHHHEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EQPDFYAEPWKLRRSLESIDIEMLEDWFFSMGGRGAQPSRGSRSKNALVAAGIIAILGEL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YGEQFQTLVLASQPERLGEWRRCLQDSLGLSREDFGPNSGIVLFERSDGLIERADRLEER HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHC GELPLIIIDAAEINVEIPILQFPIWLAFAGSPNEIYEDDGLI CCCCEEEEEECEEEEEEEEEECCEEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA