| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is yjeF [C]
Identifier: 124026415
GI number: 124026415
Start: 1395291
End: 1396982
Strand: Reverse
Name: yjeF [C]
Synonym: NATL1_17101
Alternate gene names: 124026415
Gene position: 1396982-1395291 (Counterclockwise)
Preceding gene: 124026417
Following gene: 124026414
Centisome position: 74.92
GC content: 38.24
Gene sequence:
>1692_bases ATGTTTGCAGTCTTTTTAATGTTTTCTCGACTGTTTCTTCTGAAGGCAAATGATTTAAAACTTTTTTTGTTTCTCTTGTT TCCACATTCATGGGCATTGATGATAGTAGCTTCTATTCATAGTGGGTTTGGTTGCTTTTTGATTTTGAATTGGCCTCAAT CTGATTCGGAACATTTGATGGTTTCTTCAGAGCAGATGCAAAACATAGAAAAAGAAATGTTTTCTATGGGTATGCCTGTT GAAGCTCTGATGGAAAAAGTGGGAATTGGTATTTCTTCATGGATATTAGACAGGCATGGGTTGATTGAAAATGGTGCAAT CGTTTTGGTAGGGCCTGGTCACAATGGAGGCGATGGACTTGTTGTTGCGAGAGAACTTTATATGGCAGGCGTTGATATCT CTATTTGGTGTCCATTCCCATTGAAAAAACAATTAACACAAAAACATTTTGATTATGCAATGCAGATTGGGATTGAAAAC TTGGAGCGTAAACCTGATTCAAATTCAGATTTATTATGGATTGAGGCTTTATTTGGATTAGGACAATCAAGAATTATTTC TGATGAAATACTTCGCCTATTGAATTCGAAGAAGACATTTAGTCCTGAAAAGTTAATTAGTATTGATGTCCCCGCAGGAT TAGACTCAGATAATGGAAATATAGTATCAAATACACCATGCAAAGCCAGTTCTTCGTTAACCTTGGGTTTATTTAAGTCG GGATTAATTCAAGATTCAGCTATTGATTATGTAGGTAATTTAGAGAGAGTAGATATTGGAATTCCAGATAAGATATTAGC TGGTTTTCCTGAAACACAGCCTCTAAGGATTTCTTTTTCAGATTTGTCTACTTTTGTTTGGCCCATGCTTAGTAAAAGTA AAAGTAAATATCAGAGAGGAAGAGTTCTGGTGATTGCAGGGAGTGAGAAATACAGGGGAGCAGCATCCCTTGCTTTGAAT GGAGCTTTAGCAAGTGGGGTAGGTAGTGTTAGTGCTTTTTTGCCCAATTCCGTTTCATCTGCTCTTTGGATTACTCACCC TGAAGTCTTGTTACTTGGAGATCTAAATGCTTTTCAAGACGGTTCTTCAGATTTCTCCAAAGTTTTAAATGAAGTTGACT TGAATAGGTTTGACTCGATTTTGCTCGGACCAGGATTGGGGATGGCAGAAGAAAAAGATTGTTTTGGTTCTGACTTGCAG GATTTCAAAGGCCTACTTGTTCTTGATGCTGATGCAATTAATAGGCTGTCAATAACATCAAAAGGTTGGGAGTGGCTAAA TGATAGGGAAGGTCCCACTTGGCTTACCCCTCATCTTGAAGAATTTAAAAGGTTATTTCCTTTAATTGATTGCTCGAATC CATTGAAGGCTGGAATTGAAGCTGCAAAAACTTGCAGTTCTACTGTCTTATTGAAATGTGCTCATAGTGTTATCTCTGAT CCAGAAGGTAAAACTTGGCAAATAGGGCAAGTGAATTCAAGTGTTGCAAGAACTGGCCTTGGCGATGTTTTGGCTGGGTT TGTTTCAGGGATGGGTGCTTCCGGACTGGCAAGTGATAAAAAATTGGATTCAAGTTTGCTTGCTGCGTCAGCTTTGATGC ATGCATATGCAGGGGCTTTTTCTATAAAAGGGAGCACAGCGAGCACTATTTGCACTTTTCTTGGTGAATTAATAAAAAAG GAAAGCACTTGA
Upstream 100 bases:
>100_bases AATCCTTCTACATCCCATCCAGCTTTACAGAGTAGAGCAGCCGTTAAGGAGCTATCTACTCCTCCGGAAAGCCCTACTAC AACTGATTGATCCCCAGAAA
Downstream 100 bases:
>100_bases AATGTTTTGAAACAACCATCTTGAGGGCATTAAATGGTCCATTTGGTGTCATTTGTTAACTAATCGTCAACAGAATCTGA AGCCTTCATGAAACCTTGGC
Product: fused sugar kinase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK EST
Sequences:
>Translated_563_residues MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK EST >Mature_563_residues MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK EST
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=524, Percent_Identity=25.9541984732824, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 60966; Mature: 60966
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLM CHHHHHHHHHHHHEECCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE VSSEQMQNIEKEMFSMGMPVEALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGL ECHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCE VVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIENLERKPDSNSDLLWIEALFGL EEEEEHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEHHHHCC GQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEHHHHHC GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRG CCCCHHHHHHHCCCEEEECCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC RVLVIAGSEKYRGAASLALNGALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQD CEEEEECCCCCCCHHHHEECCHHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCC GSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQDFKGLLVLDADAINRLSITS CCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCEEEECC KGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD CCCHHCCCCCCCCEECCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAF CCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE SIKGSTASTICTFLGELIKKEST EECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLM CHHHHHHHHHHHHEECCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE VSSEQMQNIEKEMFSMGMPVEALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGL ECHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCE VVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIENLERKPDSNSDLLWIEALFGL EEEEEHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEHHHHCC GQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEHHHHHC GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRG CCCCHHHHHHHCCCEEEECCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC RVLVIAGSEKYRGAASLALNGALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQD CEEEEECCCCCCCHHHHEECCHHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCC GSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQDFKGLLVLDADAINRLSITS CCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCEEEECC KGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD CCCHHCCCCCCCCEECCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAF CCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE SIKGSTASTICTFLGELIKKEST EECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]