Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is yjeF [C]

Identifier: 124026415

GI number: 124026415

Start: 1395291

End: 1396982

Strand: Reverse

Name: yjeF [C]

Synonym: NATL1_17101

Alternate gene names: 124026415

Gene position: 1396982-1395291 (Counterclockwise)

Preceding gene: 124026417

Following gene: 124026414

Centisome position: 74.92

GC content: 38.24

Gene sequence:

>1692_bases
ATGTTTGCAGTCTTTTTAATGTTTTCTCGACTGTTTCTTCTGAAGGCAAATGATTTAAAACTTTTTTTGTTTCTCTTGTT
TCCACATTCATGGGCATTGATGATAGTAGCTTCTATTCATAGTGGGTTTGGTTGCTTTTTGATTTTGAATTGGCCTCAAT
CTGATTCGGAACATTTGATGGTTTCTTCAGAGCAGATGCAAAACATAGAAAAAGAAATGTTTTCTATGGGTATGCCTGTT
GAAGCTCTGATGGAAAAAGTGGGAATTGGTATTTCTTCATGGATATTAGACAGGCATGGGTTGATTGAAAATGGTGCAAT
CGTTTTGGTAGGGCCTGGTCACAATGGAGGCGATGGACTTGTTGTTGCGAGAGAACTTTATATGGCAGGCGTTGATATCT
CTATTTGGTGTCCATTCCCATTGAAAAAACAATTAACACAAAAACATTTTGATTATGCAATGCAGATTGGGATTGAAAAC
TTGGAGCGTAAACCTGATTCAAATTCAGATTTATTATGGATTGAGGCTTTATTTGGATTAGGACAATCAAGAATTATTTC
TGATGAAATACTTCGCCTATTGAATTCGAAGAAGACATTTAGTCCTGAAAAGTTAATTAGTATTGATGTCCCCGCAGGAT
TAGACTCAGATAATGGAAATATAGTATCAAATACACCATGCAAAGCCAGTTCTTCGTTAACCTTGGGTTTATTTAAGTCG
GGATTAATTCAAGATTCAGCTATTGATTATGTAGGTAATTTAGAGAGAGTAGATATTGGAATTCCAGATAAGATATTAGC
TGGTTTTCCTGAAACACAGCCTCTAAGGATTTCTTTTTCAGATTTGTCTACTTTTGTTTGGCCCATGCTTAGTAAAAGTA
AAAGTAAATATCAGAGAGGAAGAGTTCTGGTGATTGCAGGGAGTGAGAAATACAGGGGAGCAGCATCCCTTGCTTTGAAT
GGAGCTTTAGCAAGTGGGGTAGGTAGTGTTAGTGCTTTTTTGCCCAATTCCGTTTCATCTGCTCTTTGGATTACTCACCC
TGAAGTCTTGTTACTTGGAGATCTAAATGCTTTTCAAGACGGTTCTTCAGATTTCTCCAAAGTTTTAAATGAAGTTGACT
TGAATAGGTTTGACTCGATTTTGCTCGGACCAGGATTGGGGATGGCAGAAGAAAAAGATTGTTTTGGTTCTGACTTGCAG
GATTTCAAAGGCCTACTTGTTCTTGATGCTGATGCAATTAATAGGCTGTCAATAACATCAAAAGGTTGGGAGTGGCTAAA
TGATAGGGAAGGTCCCACTTGGCTTACCCCTCATCTTGAAGAATTTAAAAGGTTATTTCCTTTAATTGATTGCTCGAATC
CATTGAAGGCTGGAATTGAAGCTGCAAAAACTTGCAGTTCTACTGTCTTATTGAAATGTGCTCATAGTGTTATCTCTGAT
CCAGAAGGTAAAACTTGGCAAATAGGGCAAGTGAATTCAAGTGTTGCAAGAACTGGCCTTGGCGATGTTTTGGCTGGGTT
TGTTTCAGGGATGGGTGCTTCCGGACTGGCAAGTGATAAAAAATTGGATTCAAGTTTGCTTGCTGCGTCAGCTTTGATGC
ATGCATATGCAGGGGCTTTTTCTATAAAAGGGAGCACAGCGAGCACTATTTGCACTTTTCTTGGTGAATTAATAAAAAAG
GAAAGCACTTGA

Upstream 100 bases:

>100_bases
AATCCTTCTACATCCCATCCAGCTTTACAGAGTAGAGCAGCCGTTAAGGAGCTATCTACTCCTCCGGAAAGCCCTACTAC
AACTGATTGATCCCCAGAAA

Downstream 100 bases:

>100_bases
AATGTTTTGAAACAACCATCTTGAGGGCATTAAATGGTCCATTTGGTGTCATTTGTTAACTAATCGTCAACAGAATCTGA
AGCCTTCATGAAACCTTGGC

Product: fused sugar kinase/uncharacterized domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV
EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN
LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS
GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN
GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ
DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD
PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK
EST

Sequences:

>Translated_563_residues
MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV
EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN
LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS
GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN
GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ
DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD
PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK
EST
>Mature_563_residues
MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLMVSSEQMQNIEKEMFSMGMPV
EALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGLVVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIEN
LERKPDSNSDLLWIEALFGLGQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS
GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRGRVLVIAGSEKYRGAASLALN
GALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQDGSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQ
DFKGLLVLDADAINRLSITSKGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD
PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAFSIKGSTASTICTFLGELIKK
EST

Specific function: Unknown

COG id: COG0062

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=524, Percent_Identity=25.9541984732824, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 60966; Mature: 60966

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLM
CHHHHHHHHHHHHEECCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE
VSSEQMQNIEKEMFSMGMPVEALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGL
ECHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCE
VVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIENLERKPDSNSDLLWIEALFGL
EEEEEHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEHHHHCC
GQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEHHHHHC
GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRG
CCCCHHHHHHHCCCEEEECCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
RVLVIAGSEKYRGAASLALNGALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQD
CEEEEECCCCCCCHHHHEECCHHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCC
GSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQDFKGLLVLDADAINRLSITS
CCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCEEEECC
KGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD
CCCHHCCCCCCCCEECCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAF
CCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
SIKGSTASTICTFLGELIKKEST
EECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFAVFLMFSRLFLLKANDLKLFLFLLFPHSWALMIVASIHSGFGCFLILNWPQSDSEHLM
CHHHHHHHHHHHHEECCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE
VSSEQMQNIEKEMFSMGMPVEALMEKVGIGISSWILDRHGLIENGAIVLVGPGHNGGDGL
ECHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCE
VVARELYMAGVDISIWCPFPLKKQLTQKHFDYAMQIGIENLERKPDSNSDLLWIEALFGL
EEEEEHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEHHHHCC
GQSRIISDEILRLLNSKKTFSPEKLISIDVPAGLDSDNGNIVSNTPCKASSSLTLGLFKS
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEHHHHHC
GLIQDSAIDYVGNLERVDIGIPDKILAGFPETQPLRISFSDLSTFVWPMLSKSKSKYQRG
CCCCHHHHHHHCCCEEEECCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
RVLVIAGSEKYRGAASLALNGALASGVGSVSAFLPNSVSSALWITHPEVLLLGDLNAFQD
CEEEEECCCCCCCHHHHEECCHHHHCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCCC
GSSDFSKVLNEVDLNRFDSILLGPGLGMAEEKDCFGSDLQDFKGLLVLDADAINRLSITS
CCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCEEEECC
KGWEWLNDREGPTWLTPHLEEFKRLFPLIDCSNPLKAGIEAAKTCSSTVLLKCAHSVISD
CCCHHCCCCCCCCEECCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEGKTWQIGQVNSSVARTGLGDVLAGFVSGMGASGLASDKKLDSSLLAASALMHAYAGAF
CCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
SIKGSTASTICTFLGELIKKEST
EECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]