| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026412
Identifier: 124026412
GI number: 124026412
Start: 1390933
End: 1392987
Strand: Reverse
Name: 124026412
Synonym: NATL1_17071
Alternate gene names: NA
Gene position: 1392987-1390933 (Counterclockwise)
Preceding gene: 124026414
Following gene: 124026411
Centisome position: 74.7
GC content: 35.09
Gene sequence:
>2055_bases TTGGAATTACCTATTGATCATTTTCGCTTATTGGGGGTTAGCCCTTCTGCAAATGCTGAAGAAGTCCTCAGGGCTTTTCA GCTAAGGCTAGATCGTCCTCCCAAGCAAGGCTTTACTTATGAAGTTTTAGCTCAGAGGTCTGAGCTTCTAAGGCTTTCTG CTGATCTTTTATCTAATCCTGCCGAACGACAATCTTACGAACTCGCTCTGATTGAGGGTTCGTCTGGACTTGAATTATCT TCAAATAGAGAAGTTGCTGGTTTACTTCTCTTGTGGGAATCTAATGCTTCTTTCCAAGCTTTCAAGCTTGCAAAAAAAGC ATTACAACCTCCACAAGCCCCAGCCTTGGGAAGTGGTAGAGAGTCAGATTTAACATTAATAGCAGCTTTAGCTTGTAGAG ATGCTTCTATTGAGGAGCAAGCTTGCAGAAGATACGCTTCAGGTGCTGATTTGCTTCAGGAAGGTATACAGTTATTGCAG AGGATGGGAAAGCTTGTTGAAGAAAGAAAAACCCTTGAATCCGATTTAGAGTCTTTACTTCCATACAGAATTCTTGATTT ATTAAGTAGAGAGAAAGAAGAAGAAAAATCTCATCAGGAAGGCCTGATGTTGCTGGAAGACTTTGTTAATAAAAGAGGTG GACTCGAAGGAAAAAGAAATTCAGAAAAAATAGCAGGATTAAATCAAAATGATTTTGAGCTGTTTTTCCTCCAAATCAGA AAATTTTTAACTGCTAAAGAACAGTCAAAAATTTATGTAAACTGGTATAGAAGAGGTTCCGAAGATGCTGGCTTTCTTGC TGCTTTTGCTTTGATTGCTTCTGGCTATTCTTATAGGAAACCAGAACTCTTGCAAGAAGCTCGGAAATATCTTCGAAATA TCAACATTAATGGCTTTGACCCTATGCCATTAATTGGATGCCTAGATCTTTTATTAGGGGATGTAACGCAAGCAGAGTCT CGTTTTCGAAGTAGTTCAGATGAGAAATTAAAAGACTGGTTAGACAATTACCCAGGCGAAACATTGGGAGCTTTATGCGA CTACTGTAGAAATTGGTTGAAAAAAGATGTATTAGTAGGTTTTAGCGATGTTGAGATACAAACTGTAAATCTTGATGATT GGTTCGCTAGCCAAGAAGTTCAAGTTTATGTAGAGCAGTTGGAATCAAAAGGGGCATTAGGCATTGCAAAAGCTGGATTT TCTTTCTTATCGTCATTGACCCCTGAACAACAAATTGAGAATAATTCATCAAGAAACTTAGAGGAAAAGGCAGATTTGCC AATGCCGGGTGGGGCTTTAGGTGAGAATTTTAATGAAAGCTCTTTCAAATCACGATTAGATATTAAAGAATTTTTCTTAA GATCTAATTTGGTTGAAAAGATAGTTTCAAAATATTATTCAATATTTGAATTGATAAAAAACTCAGATTTCAAATCTTTC ATATTAAAACGACCAATATATACAAGTTCTTTAGCATTTATTGGTTTATTTATTGTTGGAACAAGCTTAGGAGTCCTTAC GCAAAGAAAACCCTCGCAAAATAATGATCTCAGCAATATCTCTAAGTCTGAATTGGTTAAACCAGAAGATATTAAAAATA GAGATAATGGATCAACTAAAATAGAAAATAATAAAGAAAAATTAGATTTAAAAAAATCAATTCCTCTTACTTCATTAGAC CCCTCAAATCAAGAAATTAAATCTCTTGTTGAATCATGGTTGGAAGGTAAGGCGGACATTCTGAATGGTTCGGAAAGTCA GTTTCTTTCTTCTGTTGCTAGAGCCTCTCTATTCAATAGAGTTATCGAACAGAGAAAGAAAGATAAACTTTTAGGACAAA GACAGATTATTAATGCAGATATAACTTCAATCAATATTGTTCAAAAATCTGACAGGAGAATTGCAGCAGATGTTGAATTA AACTATCAAGATAAATTGATTAGTTCTTCGGGTGAGATTTTATCTGAAACGGTTATTCCTTCTTTGAAAGTTAAATATAT AATAGGTAAGAATAAAAAAAACTGGCTAATAGTTGACTATATTAGTGGAAATTAA
Upstream 100 bases:
>100_bases TTCACTTATCAATCCTTTTTAGACTTTAAGCGTCAATGGATGCAAAATGGTTAAAACCCCTTACGATGCCTAGAGCTTTT TTCTGATTACCTAGTAGCGA
Downstream 100 bases:
>100_bases AAAATAATTTTTTAAATTATTTCTGTAACTCTAAGAAAATGTTTGATGCACTAACTAATCAATTTGAAGATGCTGTAAAG GCATTTAAAGGTGAAGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MELPIDHFRLLGVSPSANAEEVLRAFQLRLDRPPKQGFTYEVLAQRSELLRLSADLLSNPAERQSYELALIEGSSGLELS SNREVAGLLLLWESNASFQAFKLAKKALQPPQAPALGSGRESDLTLIAALACRDASIEEQACRRYASGADLLQEGIQLLQ RMGKLVEERKTLESDLESLLPYRILDLLSREKEEEKSHQEGLMLLEDFVNKRGGLEGKRNSEKIAGLNQNDFELFFLQIR KFLTAKEQSKIYVNWYRRGSEDAGFLAAFALIASGYSYRKPELLQEARKYLRNININGFDPMPLIGCLDLLLGDVTQAES RFRSSSDEKLKDWLDNYPGETLGALCDYCRNWLKKDVLVGFSDVEIQTVNLDDWFASQEVQVYVEQLESKGALGIAKAGF SFLSSLTPEQQIENNSSRNLEEKADLPMPGGALGENFNESSFKSRLDIKEFFLRSNLVEKIVSKYYSIFELIKNSDFKSF ILKRPIYTSSLAFIGLFIVGTSLGVLTQRKPSQNNDLSNISKSELVKPEDIKNRDNGSTKIENNKEKLDLKKSIPLTSLD PSNQEIKSLVESWLEGKADILNGSESQFLSSVARASLFNRVIEQRKKDKLLGQRQIINADITSINIVQKSDRRIAADVEL NYQDKLISSSGEILSETVIPSLKVKYIIGKNKKNWLIVDYISGN
Sequences:
>Translated_684_residues MELPIDHFRLLGVSPSANAEEVLRAFQLRLDRPPKQGFTYEVLAQRSELLRLSADLLSNPAERQSYELALIEGSSGLELS SNREVAGLLLLWESNASFQAFKLAKKALQPPQAPALGSGRESDLTLIAALACRDASIEEQACRRYASGADLLQEGIQLLQ RMGKLVEERKTLESDLESLLPYRILDLLSREKEEEKSHQEGLMLLEDFVNKRGGLEGKRNSEKIAGLNQNDFELFFLQIR KFLTAKEQSKIYVNWYRRGSEDAGFLAAFALIASGYSYRKPELLQEARKYLRNININGFDPMPLIGCLDLLLGDVTQAES RFRSSSDEKLKDWLDNYPGETLGALCDYCRNWLKKDVLVGFSDVEIQTVNLDDWFASQEVQVYVEQLESKGALGIAKAGF SFLSSLTPEQQIENNSSRNLEEKADLPMPGGALGENFNESSFKSRLDIKEFFLRSNLVEKIVSKYYSIFELIKNSDFKSF ILKRPIYTSSLAFIGLFIVGTSLGVLTQRKPSQNNDLSNISKSELVKPEDIKNRDNGSTKIENNKEKLDLKKSIPLTSLD PSNQEIKSLVESWLEGKADILNGSESQFLSSVARASLFNRVIEQRKKDKLLGQRQIINADITSINIVQKSDRRIAADVEL NYQDKLISSSGEILSETVIPSLKVKYIIGKNKKNWLIVDYISGN >Mature_684_residues MELPIDHFRLLGVSPSANAEEVLRAFQLRLDRPPKQGFTYEVLAQRSELLRLSADLLSNPAERQSYELALIEGSSGLELS SNREVAGLLLLWESNASFQAFKLAKKALQPPQAPALGSGRESDLTLIAALACRDASIEEQACRRYASGADLLQEGIQLLQ RMGKLVEERKTLESDLESLLPYRILDLLSREKEEEKSHQEGLMLLEDFVNKRGGLEGKRNSEKIAGLNQNDFELFFLQIR KFLTAKEQSKIYVNWYRRGSEDAGFLAAFALIASGYSYRKPELLQEARKYLRNININGFDPMPLIGCLDLLLGDVTQAES RFRSSSDEKLKDWLDNYPGETLGALCDYCRNWLKKDVLVGFSDVEIQTVNLDDWFASQEVQVYVEQLESKGALGIAKAGF SFLSSLTPEQQIENNSSRNLEEKADLPMPGGALGENFNESSFKSRLDIKEFFLRSNLVEKIVSKYYSIFELIKNSDFKSF ILKRPIYTSSLAFIGLFIVGTSLGVLTQRKPSQNNDLSNISKSELVKPEDIKNRDNGSTKIENNKEKLDLKKSIPLTSLD PSNQEIKSLVESWLEGKADILNGSESQFLSSVARASLFNRVIEQRKKDKLLGQRQIINADITSINIVQKSDRRIAADVEL NYQDKLISSSGEILSETVIPSLKVKYIIGKNKKNWLIVDYISGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77020; Mature: 77020
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPIDHFRLLGVSPSANAEEVLRAFQLRLDRPPKQGFTYEVLAQRSELLRLSADLLSNP CCCCCCHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AERQSYELALIEGSSGLELSSNREVAGLLLLWESNASFQAFKLAKKALQPPQAPALGSGR CCCCCEEEEEEECCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC ESDLTLIAALACRDASIEEQACRRYASGADLLQEGIQLLQRMGKLVEERKTLESDLESLL CCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYRILDLLSREKEEEKSHQEGLMLLEDFVNKRGGLEGKRNSEKIAGLNQNDFELFFLQIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHH KFLTAKEQSKIYVNWYRRGSEDAGFLAAFALIASGYSYRKPELLQEARKYLRNININGFD HHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC PMPLIGCLDLLLGDVTQAESRFRSSSDEKLKDWLDNYPGETLGALCDYCRNWLKKDVLVG CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC FSDVEIQTVNLDDWFASQEVQVYVEQLESKGALGIAKAGFSFLSSLTPEQQIENNSSRNL CCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCC EEKADLPMPGGALGENFNESSFKSRLDIKEFFLRSNLVEKIVSKYYSIFELIKNSDFKSF HHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ILKRPIYTSSLAFIGLFIVGTSLGVLTQRKPSQNNDLSNISKSELVKPEDIKNRDNGSTK HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCCCHHCCCCCCCCCC IENNKEKLDLKKSIPLTSLDPSNQEIKSLVESWLEGKADILNGSESQFLSSVARASLFNR CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH VIEQRKKDKLLGQRQIINADITSINIVQKSDRRIAADVELNYQDKLISSSGEILSETVIP HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECHHHHHHHCCCHHHHHHCCC SLKVKYIIGKNKKNWLIVDYISGN CEEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MELPIDHFRLLGVSPSANAEEVLRAFQLRLDRPPKQGFTYEVLAQRSELLRLSADLLSNP CCCCCCHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AERQSYELALIEGSSGLELSSNREVAGLLLLWESNASFQAFKLAKKALQPPQAPALGSGR CCCCCEEEEEEECCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC ESDLTLIAALACRDASIEEQACRRYASGADLLQEGIQLLQRMGKLVEERKTLESDLESLL CCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYRILDLLSREKEEEKSHQEGLMLLEDFVNKRGGLEGKRNSEKIAGLNQNDFELFFLQIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHH KFLTAKEQSKIYVNWYRRGSEDAGFLAAFALIASGYSYRKPELLQEARKYLRNININGFD HHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC PMPLIGCLDLLLGDVTQAESRFRSSSDEKLKDWLDNYPGETLGALCDYCRNWLKKDVLVG CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC FSDVEIQTVNLDDWFASQEVQVYVEQLESKGALGIAKAGFSFLSSLTPEQQIENNSSRNL CCCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCC EEKADLPMPGGALGENFNESSFKSRLDIKEFFLRSNLVEKIVSKYYSIFELIKNSDFKSF HHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ILKRPIYTSSLAFIGLFIVGTSLGVLTQRKPSQNNDLSNISKSELVKPEDIKNRDNGSTK HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCCCHHCCCCCCCCCC IENNKEKLDLKKSIPLTSLDPSNQEIKSLVESWLEGKADILNGSESQFLSSVARASLFNR CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH VIEQRKKDKLLGQRQIINADITSINIVQKSDRRIAADVELNYQDKLISSSGEILSETVIP HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECHHHHHHHCCCHHHHHHCCC SLKVKYIIGKNKKNWLIVDYISGN CEEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA